RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 IDEP14735 1019 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 EGR1P18146 543 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NR4A1P22736 598 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SERPINF1P36955 418 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 GCLCP48506 637 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CPT1AP50416 773 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 UCP3P55916 312 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ARL4CP56559 192 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TIRAPP58753 221 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CXADRP78310 365 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 BLMHQ13867 455 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CNGB1Q14028 1251 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 BOP1Q14137 746 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 DHX8Q14562 1220 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ZACNQ401N2 412 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TEDDM1Q5T9Z0 273 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 DCAF12L1Q5VU92 463 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ICE2Q659A1 982 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 PGBD2Q6P3X8 592 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 RNF207Q6ZRF8 634 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SGMS1Q86VZ5 419 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 EXOC8Q8IYI6 725 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 COLGALT2Q8IYK4 626 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ULK2Q8IYT8 1036 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 PSD4Q8NDX1 1056 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 IL17DQ8TAD2 202 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FAM71BQ8TC56 605 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SPPL3Q8TCT6 385 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 PGBD1Q96JS3 809 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 WDR24Q96S15 920 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ADAM2Q99965 735 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TWSG1Q9GZX9 223 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 AKIP1Q9NQ31 210 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 HELLSQ9NRZ9 838 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SYBUQ9NX95 663 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MAST3O60307 1309 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FER1L4A9Z1Z3 1794 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CCDC78A2IDD5 438 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NPC1O15118 1278 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CD3EAPO15446 510 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 RPS6KA4O75676 772 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ATXN1P54253 815 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FHL3Q13643 280 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 GRAMD1BQ3KR37 738 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MGAT5BQ3V5L5 792 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 GORABQ5T7V8 394 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MRNIPQ6NTE8 343 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TAF2Q6P1X5 1199 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 UBE3BQ7Z3V4 1068 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 RAB11FIP4Q86YS3 637 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MAPKAPK5Q8IW41 473 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SLC17A8Q8NDX2 589 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 OVCA2Q8WZ82 227 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TNPO1Q92973 898 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MARS2Q96GW9 593 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 PPP1R9BQ96SB3 815 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TLR10Q9BXR5 811 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ARMT1Q9H993 441 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NCDNQ9UBB6 729 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 STAP2Q9UGK3 403 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 DMTF1Q9Y222 760 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 LRCH1Q9Y2L9 728 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CDY1Q9Y6F8 540 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 POM121BA6NF01 834 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF785A8K8V0 405 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 MPPED1O15442 326 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 NCK2O43639 380 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 TRIAP1O43715 76 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 PEX14O75381 377 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 NPPBP16860 134 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 APOBEC3AP31941 199 aaPredicted RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 ALDH9A1P49189 494 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 MCM2P49736 904 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 PDE6CP51160 858 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 RNASE9P60153 205 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SLC25A3Q00325 362 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 FOXE3Q13461 319 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SLC29A2Q14542 456 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 PDCD2Q16342 344 aaPredicted RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 C3orf38Q5JPI3 329 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SYTL1Q8IYJ3 562 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 CELF5Q8N6W0 485 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 STT3BQ8TCJ2 826 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 THAP7Q9BT49 309 aaPredicted RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 KCNK9Q9NPC2 374 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 INTS13Q9NVM9 706 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SPATA31A1Q5TZJ5 1347 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 POLRMTO00411 1230 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 KIAA0355O15063 1070 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 ZFPL1O95159 310 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 ITGB1P05556 798 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 HARSP12081 509 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 HIBADHP31937 336 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SOX10P56693 466 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 PMS2P11Q13670 270 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 E2F2Q14209 437 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 CCDC157Q569K6 752 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms