RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 CYP4A11Q02928 519 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 UPP1Q16831 310 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 GLRA4Q5JXX5 417 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 CAPRIN2Q6IMN6 1127 aaKnown RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 CC2D1AQ6P1N0 951 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 CCDC26Q8TAB7 109 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 PIGOQ8TEQ8 1089 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 IGSF8Q969P0 613 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 TRIM6Q9C030 488 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-222ENST00000555617 POLR1BQ9H9Y6 1135 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 PLXNA2O75051 1894 aa12.42□□□□□ -0.42
ABCD4-222ENST00000555617 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 hCG_1642624A0A1W2PR95 340 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 BTBD18B2RXH4 712 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 TRAK2O60296 914 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 ERLIN2O94905 339 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 PRKCGP05129 697 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 WT1P19544 449 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 EPHB3P54753 998 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 SOX4Q06945 474 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 BFSP1Q12934 665 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 ZNF77Q15935 545 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 PLA2G4FQ68DD2 849 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 EID2Q8N6I1 236 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 CCDC51Q96ER9 411 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 TOE1Q96GM8 510 aaKnown RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-222ENST00000555617 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 ITGB1BP2Q9UKP3 347 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 NFE2L3Q9Y4A8 694 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
ABCD4-222ENST00000555617 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 UBE4BO95155 1302 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 KCNJ18B7U540 433 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ZNF217O75362 1048 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 KRT7P08729 469 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 CPB1P15086 417 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 PLD1Q13393 1074 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 TESK1Q15569 626 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-222ENST00000555617 TXNDC8Q6A555 127 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 LSMEM2Q8N112 164 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ATP2A3Q93084 1043 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 WSB2Q9NYS7 404 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ANAPC2Q9UJX6 822 aa12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ATXN7L1Q9ULK2 861 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-222ENST00000555617 ZNF469Q96JG9 3925 aaPredicted RBP12.4□□□□□ -0.43
ABCD4-222ENST00000555617 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 A0A087X0B3 334 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 KAT7O95251 611 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 CD6P30203 668 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 CTSKP43235 329 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 INHBCP55103 352 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 KDSRQ06136 332 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 USP4Q13107 963 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 TGIF1Q15583 401 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 CYB5R4Q7L1T6 521 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 SLC22A12Q96S37 553 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 ACOX2Q99424 681 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 ZNF577Q9BSK1 485 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
ABCD4-222ENST00000555617 UNKQ9C0B0 810 aaKnown RBP12.39□□□□□ -0.43
ABCD4-222ENST00000555617 RNF41Q9H4P4 317 aaPredicted RBP12.39□□□□□ -0.43
ABCD4-222ENST00000555617 A0A1B0GTQ1 180 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 HOXB2P14652 356 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 ATF6P18850 670 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 AXLP30530 894 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 AVPR1AP37288 418 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 IFNAR2P48551 515 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 MLLT10P55197 1068 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 MBTD1Q05BQ5 628 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 PPP1R26Q5T8A7 1209 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-222ENST00000555617 CDCP2Q5VXM1 449 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 STKLD1Q8NE28 680 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms