RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 TMEM174Q8WUU8 243 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 SMARCD2Q92925 531 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 ASB16Q96NS5 453 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 LRRC3Q9BY71 257 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 GTPBP4Q9BZE4 634 aaKnown RBP11.39□□□□□ -0.59
SHMT2-213ENST00000554600 PLA2G2FQ9BZM2 168 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 ABCB6Q9NP58 842 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 ARHGEF3Q9NR81 526 aa11.39□□□□□ -0.59
SHMT2-213ENST00000554600 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 KRBA1A5PL33 1030 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 TRIM49BA6NDI0 452 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 PSMA7O14818 248 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 IKBKBO14920 756 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 STAU1O95793 577 aaKnown RBP11.38□□□□□ -0.59
SHMT2-213ENST00000554600 CSH1P0DML2 217 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 CSH2P0DML3 217 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 BDNFP23560 247 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ANXA13P27216 316 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 GRIK1P39086 918 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 CLDN10P78369 228 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 PFKPQ01813 784 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 SGSM1Q2NKQ1 1148 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ZACNQ401N2 412 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ZCWPW2Q504Y3 356 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ASTLQ6HA08 431 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-213ENST00000554600 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 POTEHQ6S545 545 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 LIMS2Q7Z4I7 341 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ELSPBP1Q96BH3 223 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 FUBP3Q96I24 572 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHMT2-213ENST00000554600 PKMYT1Q99640 499 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 TRMT61BQ9BVS5 477 aaKnown RBP11.38□□□□□ -0.59
SHMT2-213ENST00000554600 TBC1D17Q9HA65 648 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 SLC2A4RGQ9NR83 387 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 COL4A3Q01955 1670 aa11.38□□□□□ -0.59
SHMT2-213ENST00000554600 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 WDFY4Q6ZS81 3184 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 SLC38A8A6NNN8 435 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 FAM163BP0C2L3 166 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 PSMC3P17980 439 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 PTPN1P18031 435 aaKnown RBP11.37□□□□□ -0.59
SHMT2-213ENST00000554600 FCARP24071 287 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 GDI1P31150 447 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 MAGEA11P43364 429 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 UBE2HP62256 183 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 PPP3CAQ08209 521 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 CAMK4Q16566 473 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 CFAP221Q4G0U5 840 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 DCAF17Q5H9S7 520 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-213ENST00000554600 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 IER5LQ5T953 404 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 FAM171BQ6P995 826 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 ADSSL1Q8N142 457 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 TTC16Q8NEE8 873 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 MRPS31Q92665 395 aaKnown RBP11.37□□□□□ -0.59
SHMT2-213ENST00000554600 TAF4BQ92750 862 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 PCED1BQ96HM7 432 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 SHDQ96IW2 340 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 MKNK1Q9BUB5 465 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 DPEP3Q9H4B8 488 aa11.37□□□□□ -0.59
SHMT2-213ENST00000554600 UXTQ9UBK9 157 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-213ENST00000554600 COL4A2P08572 1712 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 HEPACAM2A8MVW5 462 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ZNF263O14978 683 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 STX10O60499 249 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ASS1P00966 412 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 HMGA1P17096 107 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 NPR3P17342 541 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TRIM21P19474 475 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 CCNE1P24864 410 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 AVPR1AP37288 418 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 PPP1R2P41236 205 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 MXI1P50539 228 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 CLCN5P51795 746 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 PMS1P54277 932 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 NLRP12P59046 1061 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 FKBP3Q00688 224 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 IFRD2Q12894 506 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ORC1Q13415 861 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 UBXN2BQ14CS0 331 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 MLF2Q15773 248 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 SLC44A4Q53GD3 710 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 CWF19L1Q69YN2 538 aaKnown RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 VSTM1Q6UX27 236 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms