RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 FAM78AQ5JUQ0 283 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 IER5LQ5T953 404 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 TANGO2Q6ICL3 276 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 FOXR2Q6PJQ5 311 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 PDZD4Q76G19 769 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 FRMD5Q7Z6J6 570 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 IRF2BP1Q8IU81 584 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 ELMOD1Q8N336 334 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 WHAMMQ8TF30 809 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 CEP63Q96MT8 703 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 KXD1Q9BQD3 176 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 BCO2Q9BYV7 579 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 ASAH2Q9NR71 780 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 RAB20Q9NX57 234 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 IGSF9Q9P2J2 1179 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 ARMCX3Q9UH62 379 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 RWDD2AQ9UIY3 292 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 COQ4Q9Y3A0 265 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 DENND4AQ7Z401 1863 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 NCANO14594 1321 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 TMEM221A6NGB7 291 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 M0R296 226 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 F11P03951 625 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 PPP1R2P41236 205 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 VIPR2P41587 438 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 NDST1P52848 882 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 USP46P62068 366 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 NOP14P78316 857 aaKnown RBP10.38□□□□□ -0.75
YBX3-212ENST00000542002 CYP27A1Q02318 531 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 PLD1Q13393 1074 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 DPCR1Q3MIW9 517 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 TCERG1LQ5VWI1 586 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
YBX3-212ENST00000542002 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 CRYBG2Q8N1P7 616 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 C12orf29Q8N999 325 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 B3GALNT2Q8NCR0 500 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 FBXL13Q8NEE6 735 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 LMO3Q8TAP4 145 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 FAM200AQ8TCP9 573 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 RSPRY1Q96DX4 576 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 GBP4Q96PP9 640 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 ARID3AQ99856 593 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 C1QTNF1Q9BXJ1 281 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 NUP62CLQ9H1M0 184 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 GDE1Q9NZC3 331 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 RAPGEFL1Q9UHV5 662 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 ASB3Q9Y575 518 aa10.38□□□□□ -0.75
YBX3-212ENST00000542002 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
YBX3-212ENST00000542002 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 ZNF197O14709 1029 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 BEST1O76090 585 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 GABRR2P28476 465 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 MAGEA11P43364 429 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 FMO5P49326 533 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 MXI1P50539 228 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
YBX3-212ENST00000542002 NLRP12P59046 1061 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 GPC5P78333 572 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 CYP4F8P98187 520 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 SIGLEC14Q08ET2 396 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 INCA1Q0VD86 236 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 TMEM31Q5JXX7 168 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 RBM43Q6ZSC3 357 aaKnown RBP10.37□□□□□ -0.75
YBX3-212ENST00000542002 TRIM59Q8IWR1 403 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 UBALD2Q8IYN6 164 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 FUKQ8N0W3 1084 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 MLKLQ8NB16 471 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 FUBP3Q96I24 572 aaKnown RBP eCLIP10.37□□□□□ -0.75
YBX3-212ENST00000542002 ASB16Q96NS5 453 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 KCNK16Q96T55 309 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 SLC46A2Q9BY10 475 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 ELOVL4Q9GZR5 314 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 ATXN3LQ9H3M9 355 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 METTL14Q9HCE5 456 aaKnown RBP10.37□□□□□ -0.75
YBX3-212ENST00000542002 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
YBX3-212ENST00000542002 NCOR1O75376 2440 aa10.37□□□□□ -0.75
YBX3-212ENST00000542002 PRR33A8MZF0 331 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 F8VP50 259 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 PMM2O15305 246 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 STX10O60499 249 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CILPO75339 1184 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 TADA3O75528 432 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 NOL4O94818 638 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CLSTN1O94985 981 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CFHP08603 1231 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 P4HA1P13674 534 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CCDC130P13994 396 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 NPR3P17342 541 aa10.36□□□□□ -0.75
YBX3-212ENST00000542002 CD58P19256 250 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms