RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 NQO1P15559 274 aaKnown RBP18.11■□□□□ 0.49
SPIDR-227ENST00000541342 CRHR2Q13324 411 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ANKRD42Q8N9B4 389 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ZIC5Q96T25 663 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 XYLT2Q9H1B5 865 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 RPF1Q9H9Y2 349 aaKnown RBP18.11■□□□□ 0.49
SPIDR-227ENST00000541342 NINJ2Q9NZG7 142 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ANAPC7Q9UJX3 599 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ZNF677Q86XU0 584 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 RBBP8NLQ8NC74 664 aaPredicted RBP18.1■□□□□ 0.49
SPIDR-227ENST00000541342 DYDC1Q8WWB3 177 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 NFICP08651 508 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 TMEM191BP0C7N4 346 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 SMIM10L2AP0DMW4 78 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 SMIM10L2BP0DMW5 78 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 MCF2P10911 925 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 SSTR3P32745 418 aaPredicted RBP18.1■□□□□ 0.49
SPIDR-227ENST00000541342 TMEM62Q0P6H9 643 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 AGAP11Q8TF27 550 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 CPA5Q8WXQ8 436 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 DDX27Q96GQ7 796 aaKnown RBP18.1■□□□□ 0.49
SPIDR-227ENST00000541342 IMPG2Q9BZV3 1241 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 DCLK3Q9C098 648 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 TRIP12Q14669 1992 aaPredicted RBP18.1■□□□□ 0.49
SPIDR-227ENST00000541342 BRCA2P51587 3418 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 A8MUI8 341 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 TCEA3O75764 348 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 ZNF132P52740 706 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 BPIFB4P59827 614 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 IRF5Q13568 498 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 KIZQ2M2Z5 673 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 C2CD6Q53TS8 623 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 EURLQ9NYK6 297 aa18.1■□□□□ 0.49
SPIDR-227ENST00000541342 CYP1A1P04798 512 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-227ENST00000541342 GNA15P30679 374 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 SGSM1Q2NKQ1 1148 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 PHLDB2Q86SQ0 1253 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 KIF2BQ8N4N8 673 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 FAM118BQ9BPY3 351 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 ADAMTS10Q9H324 1103 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 TRIM33Q9UPN9 1127 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 KRT16P08779 473 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 KLF1Q13351 362 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-227ENST00000541342 ZKSCAN8Q15776 578 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-227ENST00000541342 ASRGL1Q7L266 308 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 SPATA21Q7Z572 469 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 ANKS1BQ7Z6G8 1248 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 PRCCQ92733 491 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-227ENST00000541342 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 SIX4Q9UIU6 781 aa18.09■□□□□ 0.49
SPIDR-227ENST00000541342 IL18RAPO95256 599 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 BRAFP15056 766 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 RGS2P41220 211 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 TRPC3Q13507 836 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 JADE1Q6IE81 842 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 PRUNE1Q86TP1 453 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 FAM49AQ9H0Q0 323 aaPredicted RBP18.08■□□□□ 0.49
SPIDR-227ENST00000541342 ZFYVE28Q9HCC9 887 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 KCNK9Q9NPC2 374 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 TBK1Q9UHD2 729 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 LGALS13Q9UHV8 139 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 TLL2Q9Y6L7 1015 aa18.08■□□□□ 0.49
SPIDR-227ENST00000541342 RRN3P2A6NIE6 340 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 SUN1O94901 812 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 RRM1P23921 792 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 ASPAP45381 313 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 VPS41P49754 854 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 INHBEP58166 350 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 COPS2P61201 443 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 BEX3Q00994 111 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF410Q86VK4 478 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 MCOLN2Q8IZK6 566 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 APBA2Q99767 749 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 NIF3L1Q9GZT8 377 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 CITO14578 2027 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 A0A1B0GUA9 196 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 GPR32O75388 356 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 TNNC2P02585 160 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 CD58P19256 250 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 CENPCQ03188 943 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 SLC10A6Q3KNW5 377 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 C1orf127Q8N9H9 656 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 CXorf38Q8TB03 319 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 ARHGEF3Q9NR81 526 aa18.08■□□□□ 0.48
SPIDR-227ENST00000541342 TRIP11Q15643 1979 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 NRCAMQ92823 1304 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 THAP12O43422 761 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 RPSAP08865 295 aaKnown RBP18.07■□□□□ 0.48
SPIDR-227ENST00000541342 ADCY1Q08828 1119 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 MFSD10Q14728 455 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 ZNF699Q32M78 642 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 TGS1Q96RS0 853 aaKnown RBP18.07■□□□□ 0.48
SPIDR-227ENST00000541342 TRAIPQ9BWF2 469 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 NAALADL1Q9UQQ1 740 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 ARL2BPQ9Y2Y0 163 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 HTTP42858 3142 aa18.07■□□□□ 0.48
SPIDR-227ENST00000541342 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms