RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ENTPD3O75355 529 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 KRT36O76013 467 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 FESP07332 822 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 TSHRP16473 764 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 CNTFP26441 200 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 OSTNP61366 133 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 RAB44Q7Z6P3 723 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-203ENST00000540357 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 IPO11Q9UI26 975 aaKnown RBP13.58□□□□□ -0.24
DNMT1-203ENST00000540357 DNPEPQ9ULA0 475 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 EML1O00423 815 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 GLRA3O75311 464 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 SHMT1P34896 483 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 CYP1B1Q16678 543 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 PLA2G4FQ68DD2 849 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 NSUN6Q8TEA1 469 aaKnown RBP13.58□□□□□ -0.24
DNMT1-203ENST00000540357 EME1Q96AY2 570 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 ZNF711Q9Y462 761 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 MYH8P13535 1937 aa13.58□□□□□ -0.24
DNMT1-203ENST00000540357 EEF1B2P24534 225 aaKnown RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 FMO1Q01740 532 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■□ 25.9
DNMT1-203ENST00000540357 SMTNL2Q2TAL5 461 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 PBXIP1Q96AQ6 731 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 HDAC11Q96DB2 347 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 ARP10275 920 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 DCAF15Q66K64 600 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 OTOAQ7RTW8 1153 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 CCT7Q99832 543 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 TBC1D23Q9NUY8 699 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 DCDC2Q9UHG0 476 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 TMCC1O94876 653 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 GH1P01241 217 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 APOEP02649 317 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 SRGAP2CP0DJJ0 459 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 CCNB1P14635 433 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 EEF1DP29692 281 aaKnown RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 FLOT2Q14254 428 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 TMEM259Q4ZIN3 620 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 FAM167AQ96KS9 214 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 NIF3L1Q9GZT8 377 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 SLCO1B3Q9NPD5 702 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 DNAJC6O75061 913 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 EFNA5P52803 228 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 DLG4P78352 724 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 XKR3Q5GH77 459 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 KLC3Q6P597 504 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 SHC3Q92529 594 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
DNMT1-203ENST00000540357 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 C2orf40Q9H1Z8 148 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 FIS1Q9Y3D6 152 aa13.57□□□□□ -0.24
DNMT1-203ENST00000540357 LIASO43766 372 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 TCEA3O75764 348 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 MTA2O94776 668 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 SSTR1P30872 391 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 MTM1Q13496 603 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 RSBN1LQ6PCB5 846 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 C4orf50Q6ZRC1 276 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 FLAD1Q8NFF5 587 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 FAM149B1Q96BN6 582 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 SIX2Q9NPC8 291 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 BFARQ9NZS9 450 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 LOC100653049A0A140TA62 436 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 AIM2O14862 343 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 KRT34O76011 436 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 FDX1P10109 184 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 NPTX2P47972 431 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 KCTD19Q17RG1 926 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 ALLCQ8N6M5 410 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 CATSPER2Q96P56 530 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 WTIPA6NIX2 430 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 GRK2P25098 689 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 TNFAIP2Q03169 654 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 CCDC138Q96M89 665 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 KLHL8Q9P2G9 620 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-203ENST00000540357 ECE2O60344 883 aa13.56□□□□□ -0.24
DNMT1-203ENST00000540357 THRAP10827 490 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms