RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PPP2R5EQ16537 467 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 MRPL10Q7Z7H8 261 aaKnown RBP23.69■■□□□ 1.38
HOMER3-204ENST00000539827 CCDC50Q8IVM0 306 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 EMC1Q8N766 993 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 SLAIN1Q8ND83 568 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 TRIM51Q9BSJ1 452 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 KLHL11Q9NVR0 708 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 MTUS1Q9ULD2 1270 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 FSCN2O14926 492 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 HUS1O60921 280 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 GRK4P32298 578 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 SCNN1GP51170 649 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 EPHB4P54760 987 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 GSCP56915 257 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-204ENST00000539827 PIGHQ14442 188 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-204ENST00000539827 DSC3Q14574 896 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 FAM26DQ5JW98 314 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 OSTM1Q86WC4 334 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 KATNAL2Q8IYT4 538 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 IPO4Q8TEX9 1081 aaKnown RBP23.69■■□□□ 1.38
HOMER3-204ENST00000539827 MCRS1Q96EZ8 462 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 TSPYL2Q9H2G4 693 aaPredicted RBP23.69■■□□□ 1.38
HOMER3-204ENST00000539827 GIT1Q9Y2X7 761 aa23.69■■□□□ 1.38
HOMER3-204ENST00000539827 CENPFP49454 3210 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 ARL5CA6NH57 179 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 BHMG1C9JSJ3 638 aaPredicted RBP23.68■■□□□ 1.38
HOMER3-204ENST00000539827 THP07101 528 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 DR1Q01658 176 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 OR6B2Q6IFH4 312 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 TTC27Q6P3X3 843 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 LIMS2Q7Z4I7 341 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 ADGRF2Q8IZF7 708 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 ADAM2Q99965 735 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 SLC38A7Q9NVC3 462 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 LCMT1Q9UIC8 334 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
HOMER3-204ENST00000539827 E5RJQ4 531 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 CYB561D2O14569 222 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 FAM153BP0C7A2 387 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 CCDC130P13994 396 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 ADORA2BP29275 332 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 FAM153CQ494X1 144 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 PKDCCQ504Y2 493 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 ZFYVE27Q5T4F4 411 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 FAM102AQ5T9C2 384 aaPredicted RBP23.67■■□□□ 1.38
HOMER3-204ENST00000539827 RNF25Q96BH1 459 aaPredicted RBP23.67■■□□□ 1.38
HOMER3-204ENST00000539827 TSEN34Q9BSV6 310 aaKnown RBP23.67■■□□□ 1.38
HOMER3-204ENST00000539827 HEMGNQ9BXL5 484 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 HESX1Q9UBX0 185 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 FAM153AQ9UHL3 310 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 A0A1W2PQ45 241 aaPredicted RBP23.67■■□□□ 1.38
HOMER3-204ENST00000539827 A0A1W2PQY0 241 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 PI4K2BG5E9Z4 385 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 CHRNA3P32297 505 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 ARHGAP17Q68EM7 881 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 TXNRD3NBQ6F5E7 133 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 PMF1Q6P1K2 205 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 FAM183BPQ6ZVS7 135 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 CRYBG2Q8N1P7 616 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 DPH5Q9H2P9 285 aa23.67■■□□□ 1.38
HOMER3-204ENST00000539827 RALAP11233 206 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 PTGIRP43119 386 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 ANKS1BQ7Z6G8 1248 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 TOP6BLQ8N6T0 577 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 NIPA2Q8N8Q9 360 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 C1orf54Q8WWF1 131 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 TRIM31Q9BZY9 425 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 STARD7Q9NQZ5 370 aa23.66■■□□□ 1.38
HOMER3-204ENST00000539827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.66■■□□□ 1.38
HOMER3-204ENST00000539827 DAPK3O43293 454 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 KRT1P04264 644 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 CKBP12277 381 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 WARSP23381 471 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 COILP38432 576 aaPredicted RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 CLCNKBP51801 687 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 PDE4CQ08493 712 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 HLTFQ14527 1009 aaKnown RBP eCLIP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 ARHGEF6Q15052 776 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 CYP1B1Q16678 543 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 EMBQ6PCB8 327 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 CCDC137Q6PK04 289 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 EXD1Q8NHP7 514 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 ACSF2Q96CM8 615 aaPredicted RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 HPCAL4Q9UM19 191 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 UTP11Q9Y3A2 253 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 CASTOR2A6NHX0 329 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 PODXLO00592 558 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 ZNF623O75123 536 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 KCNJ1P48048 391 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 RAB27AP51159 221 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 DHX34Q14147 1143 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 SMC1AQ14683 1233 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 WSCD1Q658N2 575 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 JAMLQ86YT9 394 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 ARFGAP1Q8N6T3 406 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 SH3TC2Q8TF17 1288 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 PIWIL1Q96J94 861 aaKnown RBP23.65■■□□□ 1.38
HOMER3-204ENST00000539827 RSAD1Q9HA92 442 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 TRIM17Q9Y577 477 aa23.65■■□□□ 1.38
HOMER3-204ENST00000539827 FAM187AA6NFU0 413 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms