RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 GABRR2P28476 465 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 PCSK1P29120 753 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 VIPR2P41587 438 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 MXI1P50539 228 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 NDST1P52848 882 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 USP46P62068 366 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 NOP14P78316 857 aaKnown RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 CYP4F8P98187 520 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 TDGQ13569 410 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 STIM1Q13586 685 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 NFE2Q16621 373 aaPredicted RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 FAM78AQ5JUQ0 283 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 KRT39Q6A163 491 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 IQCEQ6IPM2 695 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 HFE2Q6ZVN8 426 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 ACOT1Q86TX2 421 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 SPATA2LQ8IUW3 424 aaPredicted RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 ELMOD1Q8N336 334 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 C12orf29Q8N999 325 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 TRIML1Q8N9V2 468 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 MYCBPAPQ8TBZ2 947 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 SPATA18Q8TC71 538 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 WHAMMQ8TF30 809 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 C2orf15Q8WU43 125 aaKnown RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 LRRC3BQ96PB8 259 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 BCO2Q9BYV7 579 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 ASAH2Q9NR71 780 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 HSFX1Q9UBD0 423 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 ARMCX3Q9UH62 379 aaPredicted RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 MAGED2Q9UNF1 606 aaPredicted RBP11.43□□□□□ -0.58
HMGA2-209ENST00000539662 TMEM221A6NGB7 291 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 SLC38A8A6NNN8 435 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 M0R296 226 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 TADA3O75528 432 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 BEST1O76090 585 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CFHP08603 1231 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CCDC130P13994 396 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 GTF2H1P32780 548 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 GPC5P78333 572 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 ENPEPQ07075 957 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 LRMPQ12912 555 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CFAP221Q4G0U5 840 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 TMEM31Q5JXX7 168 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CYP4A22Q5TCH4 519 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 FRMD5Q7Z6J6 570 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 B3GALNT2Q8NCR0 500 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 TAF4BQ92750 862 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 KAT5Q92993 513 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 CEP63Q96MT8 703 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 GBP4Q96PP9 640 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 KCNK16Q96T55 309 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
HMGA2-209ENST00000539662 ELOVL4Q9GZR5 314 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 SMG9Q9H0W8 520 aaKnown RBP11.42□□□□□ -0.58
HMGA2-209ENST00000539662 ATXN3LQ9H3M9 355 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 RAB20Q9NX57 234 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
HMGA2-209ENST00000539662 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
HMGA2-209ENST00000539662 ZNF638Q14966 1978 aaKnown RBP11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ANAPC1Q9H1A4 1944 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 F8VP50 259 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 CALCAP01258 141 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 F11P03951 625 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 FAM163BP0C2L3 166 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 FMO5P49326 533 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 NLRP12P59046 1061 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 SIGLEC14Q08ET2 396 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 GRM2Q14416 872 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ZNF394Q53GI3 561 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 HSP90AA4PQ58FG1 418 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 TRIM59Q8IWR1 403 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 FUKQ8N0W3 1084 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 LMO3Q8TAP4 145 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ZSCAN18Q8TBC5 510 aaPredicted RBP11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ASB16Q96NS5 453 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 C1QTNF1Q9BXJ1 281 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 SLC46A2Q9BY10 475 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 NIF3L1Q9GZT8 377 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ABCB6Q9NP58 842 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 FAM49BQ9NUQ9 324 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 IGSF9Q9P2J2 1179 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 RWDD2AQ9UIY3 292 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 ASB3Q9Y575 518 aa11.41□□□□□ -0.58
HMGA2-209ENST00000539662 COL4A2P08572 1712 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 NUP210Q8TEM1 1887 aaPredicted RBP11.4□□□□□ -0.58
HMGA2-209ENST00000539662 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 BICDL2A1A5D9 508 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 KRBA1A5PL33 1030 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 ZNF197O14709 1029 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 CILPO75339 1184 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 NOL4O94818 638 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 MICAL2O94851 1124 aa11.4□□□□□ -0.58
HMGA2-209ENST00000539662 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms