RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZNF148Q9UQR1 794 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 DRG1Q9Y295 367 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 NRCAMQ92823 1304 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 A6NJR5 290 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 NDC80O14777 642 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 ADCY6O43306 1168 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 LRCH4O75427 683 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 F2P00734 622 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 SMIM10L2AP0DMW4 78 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 SMIM10L2BP0DMW5 78 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 GPD2P43304 727 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 YARSP54577 528 aaKnown RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 VCPP55072 806 aaKnown RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 ACAP1Q15027 740 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 EPS8L3Q8TE67 593 aaKnown RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 SNX27Q96L92 541 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 DDX23Q9BUQ8 820 aaKnown RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 FRMD8P1Q9BZ68 369 aaPredicted RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 ZWILCHQ9H900 591 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 ACSL3O95573 720 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 MFSD5Q6N075 450 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 B4GALNT4Q76KP1 1039 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 NLRP14Q86W24 1093 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 NKD2Q969F2 451 aaPredicted RBP16.49■□□□□ 0.23
MKS1-204ENST00000537529 FAM107BQ9H098 131 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 GINS2Q9Y248 185 aa16.49■□□□□ 0.23
MKS1-204ENST00000537529 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
MKS1-204ENST00000537529 E7EVH7 732 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 GPR32O75388 356 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 TTC4O95801 387 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 P3H1Q32P28 736 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 MORN1Q5T089 497 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
MKS1-204ENST00000537529 HIBCHQ6NVY1 386 aaPredicted RBP16.48■□□□□ 0.23
MKS1-204ENST00000537529 DPH6Q7L8W6 267 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 EMC1Q8N766 993 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 BEST2Q8NFU1 509 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 SNTG2Q9NY99 539 aa16.48■□□□□ 0.23
MKS1-204ENST00000537529 RNF8O76064 485 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 ITGAVP06756 1048 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 CYP2C9P11712 490 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 HOXA11P31270 313 aaPredicted RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 MAP2K5Q13163 448 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 RELL1Q8IUW5 271 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 ZCCHC9Q8N567 271 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 TTC13Q8NBP0 860 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 UBA3Q8TBC4 463 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 MYCBPAPQ8TBZ2 947 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 ZNF473Q8WTR7 871 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 ASNSD1Q9NWL6 643 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 GNEQ9Y223 722 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 MBLAC1A4D2B0 266 aaPredicted RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 DNALI1O14645 258 aaPredicted RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 FAM107AO95990 144 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 MMP13P45452 471 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 SLCO1A2P46721 670 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 AUHQ13825 339 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 MFSD10Q14728 455 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 OASLQ15646 514 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 GOLGA7BQ2TAP0 167 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 TAOK1Q7L7X3 1001 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 LRRC52Q8N7C0 313 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 CENPTQ96BT3 561 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 SERPINB12Q96P63 405 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 CCT8L2Q96SF2 557 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 DNAJC17Q9NVM6 304 aaKnown RBP16.47■□□□□ 0.23
MKS1-204ENST00000537529 NINJ2Q9NZG7 142 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
MKS1-204ENST00000537529 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 GMNCA6NCL1 334 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 TRAPPC3O43617 180 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 CYP3A5P20815 502 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 KDELR1P24390 212 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 IL1R2P27930 398 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 ATP5DP30049 168 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 AXLP30530 894 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 ARSEP51690 589 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 SEC24CP53992 1094 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 TAZQ16635 292 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 SMTNL2Q2TAL5 461 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 BBS12Q6ZW61 710 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 KAT2BQ92831 832 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 HAUS1Q96CS2 278 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 OSMRQ99650 979 aa16.46■□□□□ 0.23
MKS1-204ENST00000537529 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms