RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 INCA1Q0VD86 236 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 ELAVL2Q12926 359 aaKnown RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 IER5LQ5T953 404 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 UNC93AQ86WB7 457 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 ZNF677Q86XU0 584 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 UBR7Q8N806 425 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 SLC22A17Q8WUG5 538 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 ACSF2Q96CM8 615 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 ZNF830Q96NB3 372 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 KLHL5Q96PQ7 755 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 C2orf16Q68DN1 1984 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 B3GAT3O94766 335 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 ALDH2P05091 517 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 ASGR2P07307 311 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 ADH1AP07327 375 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CNPP09543 421 aaKnown RBP11.48□□□□□ -0.57
UBE3B-205ENST00000535900 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CLCN4P51793 760 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CLCNKBP51801 687 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 APBA1Q02410 837 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 ARHGAP44Q17R89 818 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 PPP1R2P3Q6NXS1 205 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 GJB7Q6PEY0 223 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 IRF2BP2Q7Z5L9 587 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CCDC42Q96M95 316 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 MMS19Q96T76 1030 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 MFSD1Q9H3U5 465 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 LUC7LQ9NQ29 371 aaKnown RBP11.48□□□□□ -0.57
UBE3B-205ENST00000535900 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CISHQ9NSE2 258 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 PCDHB4Q9Y5E5 795 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
UBE3B-205ENST00000535900 CASTOR2A6NHX0 329 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 M0QZQ0 153 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 KIF2AO00139 706 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 ZSCAN12O43309 604 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 LRRN2O75325 713 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 CILPO75339 1184 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 KIF4AO95239 1232 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 GLUD1P00367 558 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 PDGFBP01127 241 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 CYP11A1P05108 521 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 ODC1P11926 461 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 KRT5P13647 590 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 TYMPP19971 482 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 AVPR2P30518 371 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 CLCN1P35523 988 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 LHX1P48742 406 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 PDE6CP51160 858 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 ZNF132P52740 706 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 TCF15Q12870 199 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 STILQ15468 1287 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 C10orf76Q5T2E6 689 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 TMEM270Q6UE05 265 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 GPR149Q86SP6 731 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 METTL23Q86XA0 190 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 ZDHHC14Q8IZN3 488 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 SUSD3Q96L08 255 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 SENP8Q96LD8 212 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 PHOX2BQ99453 314 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 OXCT2Q9BYC2 517 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 SMOC2Q9H3U7 446 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 FAM86C1Q9NVL1 165 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
UBE3B-205ENST00000535900 AJAP1Q9UKB5 411 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-205ENST00000535900 ATP8B3O60423 1300 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 CYB561D2O14569 222 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 PPEF2O14830 753 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 SYN3O14994 580 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 MED7O43513 233 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 PCSK1P29120 753 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 USP8P40818 1118 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 TDRD12Q587J7 1177 aaKnown RBP11.46□□□□□ -0.57
UBE3B-205ENST00000535900 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 TRIM72Q6ZMU5 477 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 ZNF662Q6ZS27 426 aa11.46□□□□□ -0.57
UBE3B-205ENST00000535900 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms