RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 KYAT1Q16773 422 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 SV2CQ496J9 727 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PMPCBO75439 489 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 ITGB6P18564 788 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 ISLR2Q6UXK2 745 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 LPAR1Q92633 364 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SERPINB5P36952 375 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 CLCN3P51790 818 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 MRPL40Q9NQ50 206 aaKnown RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 EXTL3O43909 919 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 STX3Q13277 289 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 NR1I3Q14994 352 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 RASGRP2Q7LDG7 609 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 DPP3Q9NY33 737 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 CDYLQ9Y232 598 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 MSH4O15457 936 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 IPCEF1Q8WWN9 437 aaPredicted RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SOX13Q9UN79 622 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 KRT75O95678 551 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 KLF15Q9UIH9 416 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 CPSF4O95639 269 aaKnown RBP13.13□□□□□ -0.31
SPG11-203ENST00000535302 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
SPG11-203ENST00000535302 SH3BGRLO75368 114 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 OVGP1Q12889 678 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 STAT4Q14765 748 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 TOMM20Q15388 145 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ABCB1P08183 1280 aaPredicted RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 GLB1LQ6UWU2 654 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 PPP1R13LQ8WUF5 828 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 CAAP1Q9H8G2 361 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 KLC4Q9NSK0 619 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 TULP4Q9NRJ4 1543 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ATP5HO75947 161 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 ERAP1Q9NZ08 941 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 A8MX80 341 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 M0QYT0 321 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 GYPCP04921 128 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 FGFR2P21802 821 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 GLRBP48167 497 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 NFIL3Q16649 462 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 TBC1D19Q8N5T2 526 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 SCFD1Q8WVM8 642 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
SPG11-203ENST00000535302 ATP6V1HQ9UI12 483 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 KCNA3P22001 575 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ALDH1A3P47895 512 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 BLOC1S5Q8TDH9 187 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 CNDP1Q96KN2 507 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 FAM96AQ9H5X1 160 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
SPG11-203ENST00000535302 ARP10275 920 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 SERPINB10P48595 397 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 NAB2Q15742 525 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 THUMPD3Q9BV44 507 aaKnown RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 POLG2Q9UHN1 485 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CCDC22O60826 627 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 MED24O75448 989 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 MDH1P40925 334 aaKnown RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 TAF5Q15542 800 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CHI3L2Q15782 390 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms