RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 HMGA1P17096 107 aaKnown RBP19.98■□□□□ 0.79
GMDS-208ENST00000530927 PTPN1P18031 435 aaKnown RBP19.98■□□□□ 0.79
GMDS-208ENST00000530927 FCARP24071 287 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 GABRR2P28476 465 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 MXI1P50539 228 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 CYP4F8P98187 520 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 FAM78AQ5JUQ0 283 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 IER5LQ5T953 404 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 KRT39Q6A163 491 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 TANGO2Q6ICL3 276 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 MYCBPAPQ8TBZ2 947 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 TWNKQ96RR1 684 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 B3GNT5Q9BYG0 378 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 ARMCX3Q9UH62 379 aaPredicted RBP19.98■□□□□ 0.79
GMDS-208ENST00000530927 MAGED2Q9UNF1 606 aaPredicted RBP19.98■□□□□ 0.79
GMDS-208ENST00000530927 DUSP12Q9UNI6 340 aa19.98■□□□□ 0.79
GMDS-208ENST00000530927 ZNF197O14709 1029 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 CFHP08603 1231 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ENPEPQ07075 957 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 VEPH1Q14D04 833 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 CFAP221Q4G0U5 840 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 TMEM150AQ86TG1 271 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ACOT1Q86TX2 421 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 B3GALNT2Q8NCR0 500 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ZNF518BQ9C0D4 1074 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 NUP62CLQ9H1M0 184 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ABCB6Q9NP58 842 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 MAGEC2Q9UBF1 373 aaPredicted RBP19.97■□□□□ 0.79
GMDS-208ENST00000530927 ASB3Q9Y575 518 aa19.97■□□□□ 0.79
GMDS-208ENST00000530927 ZFP37Q9Y6Q3 630 aaPredicted RBP19.97■□□□□ 0.79
GMDS-208ENST00000530927 PRR33A8MZF0 331 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 GTF2H1P32780 548 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 VIPR2P41587 438 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 NDST1P52848 882 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 FILIP1Q7Z7B0 1213 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 ITIH5Q86UX2 942 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 UBALD2Q8IYN6 164 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 TRIML1Q8N9V2 468 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 TAF4BQ92750 862 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 TATDN2Q93075 761 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 CEP63Q96MT8 703 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 ASB16Q96NS5 453 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 ARID3AQ99856 593 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 BCO2Q9BYV7 579 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 SLITRK6Q9H5Y7 841 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 GDE1Q9NZC3 331 aa19.96■□□□□ 0.79
GMDS-208ENST00000530927 SLC38A8A6NNN8 435 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 CD58P19256 250 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 PPP1R2P41236 205 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 DPCR1Q3MIW9 517 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 CCDC40Q4G0X9 1142 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 C4orf50Q6ZRC1 276 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 ZSCAN18Q8TBC5 510 aaPredicted RBP19.95■□□□□ 0.78
GMDS-208ENST00000530927 RSPRY1Q96DX4 576 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 SRRTQ9BXP5 876 aaKnown RBP19.95■□□□□ 0.78
GMDS-208ENST00000530927 RAB20Q9NX57 234 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 OBSL1O75147 1896 aa19.95■□□□□ 0.78
GMDS-208ENST00000530927 BICDL2A1A5D9 508 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 TADA3O75528 432 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 MICAL2O94851 1124 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 FAM163BP0C2L3 166 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 CCDC130P13994 396 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 GRIK1P39086 918 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 USP46P62068 366 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 GPC5P78333 572 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 GRM2Q14416 872 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 TAF12Q16514 161 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 GPR158Q5T848 1215 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 PAQR9Q6ZVX9 377 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 FRMD5Q7Z6J6 570 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 C12orf29Q8N999 325 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 LEMD2Q8NC56 503 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 FBXL13Q8NEE6 735 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 PBXIP1Q96AQ6 731 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 FUBP3Q96I24 572 aaKnown RBP eCLIP19.94■□□□□ 0.785e-6■■■■□ 21.7
GMDS-208ENST00000530927 NIF3L1Q9GZT8 377 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 SMG9Q9H0W8 520 aaKnown RBP19.94■□□□□ 0.78
GMDS-208ENST00000530927 FAM49BQ9NUQ9 324 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 CA14Q9ULX7 337 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
GMDS-208ENST00000530927 F8VP50 259 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 F11P03951 625 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 P4HA1P13674 534 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 PTMSP20962 102 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 MAGEA11P43364 429 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 NLRP12P59046 1061 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 RPL10AP62906 217 aaKnown RBP19.93■□□□□ 0.78
GMDS-208ENST00000530927 MTSS1LQ765P7 747 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 WHAMMQ8TF30 809 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 IMPG2Q9BZV3 1241 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 KRBA1A5PL33 1030 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 SRFP11831 508 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 VCPP55072 806 aaKnown RBP19.93■□□□□ 0.78
GMDS-208ENST00000530927 LRMPQ12912 555 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 MAPRE1Q15691 268 aaKnown RBP19.93■□□□□ 0.78
GMDS-208ENST00000530927 ZNF394Q53GI3 561 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 VITQ6UXI7 678 aa19.93■□□□□ 0.78
GMDS-208ENST00000530927 SMARCD2Q92925 531 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms