RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 OSTM1Q86WC4 334 aa25.34■■□□□ 1.65
CPSF1-202ENST00000527827 TRMT2BQ96GJ1 504 aaKnown RBP25.34■■□□□ 1.65
CPSF1-202ENST00000527827 MYRFLQ96LU7 910 aa25.34■■□□□ 1.65
CPSF1-202ENST00000527827 ABCB6Q9NP58 842 aa25.34■■□□□ 1.65
CPSF1-202ENST00000527827 EXOC7Q9UPT5 735 aa25.34■■□□□ 1.65
CPSF1-202ENST00000527827 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.34■■□□□ 1.65
CPSF1-202ENST00000527827 CLIC4Q9Y696 253 aa25.34■■□□□ 1.65
CPSF1-202ENST00000527827 TM4SF5O14894 197 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 HUS1O60921 280 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 CCDC192P0DO97 292 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 GJA4P35212 333 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 CASP5P51878 434 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 RPL10AP62906 217 aaKnown RBP25.33■■□□□ 1.65
CPSF1-202ENST00000527827 AMPD2Q01433 879 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 PDGFRLQ15198 375 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 CAMKK1Q8N5S9 505 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 DDX1Q92499 740 aaKnown RBP25.33■■□□□ 1.65
CPSF1-202ENST00000527827 ACCSQ96QU6 501 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 SLC22A12Q96S37 553 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 P2RY13Q9BPV8 354 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 UXTQ9UBK9 157 aaPredicted RBP25.33■■□□□ 1.65
CPSF1-202ENST00000527827 GTF3C4Q9UKN8 822 aa25.33■■□□□ 1.65
CPSF1-202ENST00000527827 TULP1O00294 542 aaPredicted RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 AKAP3O75969 853 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 GAP43P17677 238 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 DRD1P21728 446 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 FAM160A1Q05DH4 1040 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 MTF1Q14872 753 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 ZNF77Q15935 545 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 PLA2G2CQ5R387 149 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 IL31Q6EBC2 164 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 TMEM86AQ8N2M4 240 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 LRRC52Q8N7C0 313 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 C12orf50Q8NA57 414 aaPredicted RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 CACTINQ8WUQ7 758 aaKnown RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 EZH1Q92800 747 aaPredicted RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 ZC3H10Q96K80 434 aaKnown RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 CYP2S1Q96SQ9 504 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 ECT2Q9H8V3 914 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 GDAP2Q9NXN4 497 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 RBAKQ9NYW8 714 aaPredicted RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 CCDC39Q9UFE4 941 aa25.32■■□□□ 1.64
CPSF1-202ENST00000527827 FBXO2Q9UK22 296 aaPredicted RBP25.32■■□□□ 1.64
CPSF1-202ENST00000527827 HCRTO43612 131 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 GCNT3O95395 438 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 MYL7Q01449 175 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 CSGALNACT2Q8N6G5 542 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 HHIPQ96QV1 700 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 FGFBP2Q9BYJ0 223 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 SMOC1Q9H4F8 434 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 TMEM206Q9H813 350 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 TRPC7Q9HCX4 862 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 SIX4Q9UIU6 781 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 ITGA11Q9UKX5 1188 aa25.31■■□□□ 1.64
CPSF1-202ENST00000527827 HELZP42694 1942 aaKnown RBP25.3■■□□□ 1.64
CPSF1-202ENST00000527827 USP24Q9UPU5 2620 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 GOLGA8IPA6NC78 632 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 GOLGA8JA6NMD2 632 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 GABRDO14764 452 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 LDHAP00338 332 aaKnown RBP25.3■■□□□ 1.64
CPSF1-202ENST00000527827 GARTP22102 1010 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 KCNA4P22459 653 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 USP4Q13107 963 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 ST3GAL2Q16842 350 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 FBXO43Q4G163 708 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 RRAGBQ5VZM2 374 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 SV2BQ7L1I2 683 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 CPA6Q8N4T0 437 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 OSCP1Q8WVF1 389 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 CBWD1Q9BRT8 395 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 PDE11AQ9HCR9 933 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 OLFML3Q9NRN5 406 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 DUS2Q9NX74 493 aaKnown RBP25.3■■□□□ 1.64
CPSF1-202ENST00000527827 PCDHGA5Q9Y5G8 931 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 SNX9Q9Y5X1 595 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 WNT6Q9Y6F9 365 aa25.3■■□□□ 1.64
CPSF1-202ENST00000527827 USP17L7P0C7H9 530 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 PLK5Q496M5 336 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 CFAP221Q4G0U5 840 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 STPG1Q5TH74 334 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 TOP6BLQ8N6T0 577 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 RPLP0P6Q8NHW5 317 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 SPATA18Q8TC71 538 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 CLIC6Q96NY7 704 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 GCNT4Q9P109 453 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 PCDHB13Q9Y5F0 798 aa25.29■■□□□ 1.64
CPSF1-202ENST00000527827 SRPRBQ9Y5M8 271 aaKnown RBP25.29■■□□□ 1.64
CPSF1-202ENST00000527827 TRAV19A0A0A6YYK7 116 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 KRT19P08727 400 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 MPLP40238 635 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 RBP5P82980 135 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 SOWAHAQ2M3V2 549 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 EML3Q32P44 896 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 N4BP2L1Q5TBK1 243 aaPredicted RBP25.28■■□□□ 1.64
CPSF1-202ENST00000527827 SYT13Q7L8C5 426 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 SPATA2LQ8IUW3 424 aaPredicted RBP25.28■■□□□ 1.64
CPSF1-202ENST00000527827 SCN4BQ8IWT1 228 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 ADGRF2Q8IZF7 708 aa25.28■■□□□ 1.64
CPSF1-202ENST00000527827 ARL14EPQ8N8R7 260 aaPredicted RBP25.28■■□□□ 1.64
CPSF1-202ENST00000527827 CD101Q93033 1021 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms