RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
SKP1-209ENST00000522552 STX16O14662 325 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 DYNC1LI2O43237 492 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 GLP2RO95838 553 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 FUCA1P04066 466 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CKBP12277 381 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PECAM1P16284 738 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 KLRC1P26715 233 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 IL1R2P27930 398 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 EPHA8P29322 1005 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 PSMC2P35998 433 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 THPOP40225 353 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PAFAH1B1P43034 410 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CHRNA4P43681 627 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 KCNJ5P48544 419 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MCM2P49736 904 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ZNF41P51814 821 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 RCAN1P53805 252 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 POLR2FP61218 127 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 C17orf67Q0P5P2 114 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TRIM28Q13263 835 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 DCTN2Q13561 401 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 RAB32Q13637 225 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PRICKLE4Q2TBC4 344 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 BTBD16Q32M84 506 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PRRT3Q5FWE3 981 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MROH9Q5TGP6 573 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MTFR2Q6P444 385 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 IYDQ6PHW0 289 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 SLC2A7Q6PXP3 512 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CRTC1Q6UUV9 634 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ACAD11Q709F0 780 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 GPR149Q86SP6 731 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 FAM129CQ86XR2 697 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 SCML4Q8N228 414 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TMCO5AQ8N6Q1 288 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 USP38Q8NB14 1042 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TNPO1Q92973 898 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 PTP4A1Q93096 173 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 C3orf49Q96BT1 292 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 NOL10Q9BSC4 688 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 SLC25A18Q9H1K4 315 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 SEMA6CQ9H3T2 930 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 HEYLQ9NQ87 328 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 RXFP3Q9NSD7 469 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 HCFC1R1Q9NWW0 138 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PLA2G3Q9NZ20 509 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MID2Q9UJV3 735 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 WASF3Q9UPY6 502 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 A0A0A0MRY4 1105 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MBD3L4A6NDZ8 208 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 MBD3L3A6NE82 208 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 DDX39AO00148 427 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 F2RL2O00254 374 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CAPN9O14815 690 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 AKR1B10O60218 316 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ADAM23O75077 832 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 UBL4AP11441 157 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 C6P13671 934 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TBXAS1P24557 533 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 KLRK1P26718 216 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PSMB10P40306 273 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 HARS2P49590 506 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 GALK1P51570 392 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 RARSP54136 660 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 ALDH18A1P54886 795 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 ATP8B2P98198 1209 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 DDR1Q08345 913 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CDK5R2Q13319 367 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 MTA1Q13330 715 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TNIP1Q15025 636 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TAF7Q15545 349 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 CCDC178Q5BJE1 867 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 EMC4Q5J8M3 183 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TTC22Q5TAA0 569 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 STEAP3Q658P3 488 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 USP17L6PQ6QN14 398 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ZPBP2Q6X784 338 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 LRRC8DQ7L1W4 858 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 RAB11FIP2Q7L804 512 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 SYT13Q7L8C5 426 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 PIWIL3Q7Z3Z3 882 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 GLB1L2Q8IW92 636 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 ZGPATQ8N5A5 531 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 ARRDC4Q8NCT1 418 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 TMEM52Q8NDY8 209 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CCHCR1Q8TD31 782 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 RSC1A1Q92681 617 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 STAMQ92783 540 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 VPS33AQ96AX1 596 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 KTI12Q96EK9 354 aaPredicted RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 CEP95Q96GE4 821 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 CCDC43Q96MW1 224 aaKnown RBP4.38□□□□□ -1.71
SKP1-209ENST00000522552 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
SKP1-209ENST00000522552 FUZQ9BT04 418 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms