RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 FAM193AP78312 1265 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 HDAC1Q13547 482 aaPredicted RBP3.95□□□□□ -1.78
CHD1-207ENST00000511628 KIF22Q14807 665 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 AMOTQ4VCS5 1084 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 RBM20Q5T481 1227 aaKnown RBP3.95□□□□□ -1.78
CHD1-207ENST00000511628 TAF2Q6P1X5 1199 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 USP37Q86T82 979 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 SKAP1Q86WV1 359 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 PPP1R3BQ86XI6 285 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 SAMD3Q8N6K7 520 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 LRTOMTQ8WZ04 291 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 FKBP10Q96AY3 582 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 SLC35A4Q96G79 324 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 CDK5RAP3Q96JB5 506 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 VKORC1Q9BQB6 163 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 ALG8Q9BVK2 526 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 TINAGL1Q9GZM7 467 aaPredicted RBP3.95□□□□□ -1.78
CHD1-207ENST00000511628 GPR35Q9HC97 309 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 KLC4Q9NSK0 619 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 SEMA4GQ9NTN9 838 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 RIPOR2Q9Y4F9 1068 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 USP19O94966 1318 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 ARID4BQ4LE39 1312 aaPredicted RBP3.95□□□□□ -1.78
CHD1-207ENST00000511628 SPATA31A3Q5VYP0 1347 aa3.95□□□□□ -1.78
CHD1-207ENST00000511628 CFAP69A5D8W1 941 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 LINC00473A8K010 186 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 ADM5C9JUS6 153 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 GCOM1H8Y6P7 765 aaPredicted RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 MYO1CO00159 1063 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 GOLIM4O00461 696 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 LDHAP00338 332 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 AHSGP02765 367 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 IFIT2P09913 472 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 EBLN1P0CF75 366 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 NPR1P16066 1061 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 FBLP22087 321 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 PIK3CBP42338 1070 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 IL12RB1P42701 662 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 GCLCP48506 637 aaPredicted RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 ALDH9A1P49189 494 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 ALDH5A1P51649 535 aaPredicted RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 EIF2B5Q13144 721 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 PICALMQ13492 652 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 TBCCQ15814 346 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 TXNRD1Q16881 649 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 KHDC1LQ5JSQ8 128 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 TEDDM1Q5T9Z0 273 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 FAM160B1Q5W0V3 765 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 DARS2Q6PI48 645 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 FAM90A1Q86YD7 464 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 RASAL3Q86YV0 1011 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 POC1BQ8TC44 478 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 VOPP1Q96AW1 172 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 FAM136AQ96C01 138 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 MOGAT1Q96PD6 335 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 TTYH3Q9C0H2 523 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 MRPL46Q9H2W6 279 aaKnown RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 SMOC2Q9H3U7 446 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 EHD3Q9NZN3 535 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 TAGLN3Q9UI15 199 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 CPA4Q9UI42 421 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 CCNL1Q9UK58 526 aaPredicted RBP3.94□□□□□ -1.78
CHD1-207ENST00000511628 WNT6Q9Y6F9 365 aa3.94□□□□□ -1.78
CHD1-207ENST00000511628 PRSS29PA6NIE9 313 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 NXPH3O95157 252 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 RHOP08100 348 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 KITP10721 976 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 MYF5P13349 255 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ZFXP17010 805 aaPredicted RBP3.93□□□□□ -1.78
CHD1-207ENST00000511628 CCT8P50990 548 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 SOX10P56693 466 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 EXOSC9Q06265 439 aaKnown RBP3.93□□□□□ -1.78
CHD1-207ENST00000511628 BMPR2Q13873 1038 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 FGL2Q14314 439 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 BRD3Q15059 726 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 LONRF1Q17RB8 773 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
CHD1-207ENST00000511628 ZKSCAN2Q63HK3 967 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 XRRA1Q6P2D8 792 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 TMEM108Q6UXF1 575 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 AMIGO2Q86SJ2 522 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 MORC1Q86VD1 984 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 SPICE1Q8N0Z3 855 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 IL31RAQ8NI17 732 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ATRIPQ8WXE1 791 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 LRIG1Q96JA1 1093 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 PBKQ96KB5 322 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 MRGPRX1Q96LB2 322 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 OSBPL9Q96SU4 736 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 TBCBQ99426 244 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 NELL2Q99435 816 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ARPC5LQ9BPX5 153 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ELAC2Q9BQ52 826 aaKnown RBP3.93□□□□□ -1.78
CHD1-207ENST00000511628 VSX1Q9NZR4 365 aaPredicted RBP3.93□□□□□ -1.78
CHD1-207ENST00000511628 PADI4Q9UM07 663 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 DAAM1Q9Y4D1 1078 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 ENTPD2Q9Y5L3 495 aa3.93□□□□□ -1.78
CHD1-207ENST00000511628 PCSK5Q92824 1860 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms