RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ACOT1Q86TX2 421 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 UNC93AQ86WB7 457 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 LEMD2Q8NC56 503 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 ITFG1Q8TB96 612 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 ENOX1Q8TC92 643 aaKnown RBP13.62□□□□□ -0.23
CLIP2-209ENST00000493166 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 TATDN2Q93075 761 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 PCED1BQ96HM7 432 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 NT5C1BQ96P26 610 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 MYADMQ96S97 322 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 DNAI2Q9GZS0 605 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-209ENST00000493166 HMGXB4Q9UGU5 601 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 MRPS23Q9Y3D9 190 aaKnown RBP13.62□□□□□ -0.23
CLIP2-209ENST00000493166 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
CLIP2-209ENST00000493166 HELZP42694 1942 aaKnown RBP13.61□□□□□ -0.23
CLIP2-209ENST00000493166 MYL4P12829 197 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 BDNFP23560 247 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 MAGEA11P43364 429 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 GPR15P49685 360 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 LRMPQ12912 555 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 SLC5A9Q2M3M2 681 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 DNAJB7Q7Z6W7 309 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-209ENST00000493166 RNF135Q8IUD6 432 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 GPR152Q8TDT2 470 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 ING5Q8WYH8 240 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 ARID3AQ99856 593 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 MED10Q9BTT4 135 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 ELOVL4Q9GZR5 314 aa13.61□□□□□ -0.23
CLIP2-209ENST00000493166 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-209ENST00000493166 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 TRIM66O15016 1216 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CILPO75339 1184 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CEBPBP17676 345 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 TBXAS1P24557 533 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 ANXA13P27216 316 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 GRIK1P39086 918 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 EPHA5P54756 1037 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 YWHAEP62258 255 aaKnown RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CUL2Q13617 745 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 KCNJ12Q14500 433 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 MAN2A1Q16706 1144 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 DDR2Q16832 855 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 PRSS36Q5K4E3 855 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 SDHAF4Q5VUM1 108 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 TMC8Q8IU68 726 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 PPM1KQ8N3J5 372 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 FGF13Q92913 245 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 TCEAL4Q96EI5 215 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 TWNKQ96RR1 684 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 B3GNT5Q9BYG0 378 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 ZNF518BQ9C0D4 1074 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 NAT10Q9H0A0 1025 aaKnown RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 FAM124BQ9H5Z6 455 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CISHQ9NSE2 258 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 SAMSN1Q9NSI8 373 aaKnown RBP13.6□□□□□ -0.23
CLIP2-209ENST00000493166 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CDH7Q9ULB5 785 aa13.6□□□□□ -0.23
CLIP2-209ENST00000493166 CLDN5O00501 218 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 FGF19O95750 216 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 CSH1P0DML2 217 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 CSH2P0DML3 217 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 LAMP2P13473 410 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 CCR2P41597 374 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 MYL5Q02045 173 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-209ENST00000493166 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 ZNF394Q53GI3 561 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 TCP11X2Q5H9J9 407 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 FAM35AQ86V20 835 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 STKLD1Q8NE28 680 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 LMO3Q8TAP4 145 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 GCNAQ96QF7 691 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 CRACR2AQ9BSW2 395 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
CLIP2-209ENST00000493166 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-209ENST00000493166 FAM49BQ9NUQ9 324 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 MUTYHQ9UIF7 546 aa13.59□□□□□ -0.23
CLIP2-209ENST00000493166 MAGED2Q9UNF1 606 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-209ENST00000493166 A0A1W2PRU2 124 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SYCE3A1L190 88 aa13.58□□□□□ -0.24
CLIP2-209ENST00000493166 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms