RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 HTRA2O43464 458 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 PRF1P14222 555 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 NANOS2P60321 138 aaKnown RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 GPSM2P81274 684 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 KLF1Q13351 362 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 ZNF268Q14587 947 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 TRIM71Q2Q1W2 868 aaKnown RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 TBC1D25Q3MII6 688 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 C3orf36Q3SXR2 165 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 ZNF813Q6ZN06 617 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 C9orf47Q6ZRZ4 202 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 PPP1R32Q7Z5V6 425 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 WDR66Q8TBY9 1149 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 VRK1Q99986 396 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 FOXP1Q9H334 677 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 SLAMF7Q9NQ25 335 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 CCNL1Q9UK58 526 aaPredicted RBP3.67□□□□□ -1.82
CCDC93-209ENST00000488908 LIMCH1Q9UPQ0 1083 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 NT5C1B-RDH14C9J2C7 533 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 EXOC3O60645 756 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 ABLIM3O94929 683 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 EYA4O95677 639 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 GNAI2P04899 355 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 SMARCA1P28370 1054 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 HTR6P50406 440 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 SNAPC2Q13487 334 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 KIF22Q14807 665 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 KHDC1Q4VXA5 237 aaKnown RBP3.66□□□□□ -1.82
CCDC93-209ENST00000488908 MEX3CQ5U5Q3 659 aaKnown RBP3.66□□□□□ -1.82
CCDC93-209ENST00000488908 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 LHFPL2Q6ZUX7 228 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 TTC7BQ86TV6 843 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 KRT78Q8N1N4 520 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 TERB1Q8NA31 727 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 ABHD11Q8NFV4 315 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 NSUN6Q8TEA1 469 aaKnown RBP3.66□□□□□ -1.82
CCDC93-209ENST00000488908 COG1Q8WTW3 980 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 DDX17Q92841 729 aaKnown RBP3.66□□□□□ -1.82
CCDC93-209ENST00000488908 KAT5Q92993 513 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 GLOD4Q9HC38 313 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 SERTAD3Q9UJW9 196 aa3.66□□□□□ -1.82
CCDC93-209ENST00000488908 CCDC154A6NI56 674 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 PRSS29PA6NIE9 313 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 ADAM10O14672 748 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 TJP3O95049 919 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 C5AR1P21730 350 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 EDNRBP24530 442 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 PIK3CGP48736 1102 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 TPTEP56180 551 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 GHRHRQ02643 423 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 NPY5RQ15761 445 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 RNF219Q5W0B1 726 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-209ENST00000488908 MTHFD1LQ6UB35 978 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 LAYNQ6UX15 382 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 Q6ZWC4 215 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 USP37Q86T82 979 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC93-209ENST00000488908 ZBTB8BQ8NAP8 495 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-209ENST00000488908 XAGE5Q8WWM1 108 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 JADE3Q92613 823 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 SNX18Q96RF0 628 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 SLKQ9H2G2 1235 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-209ENST00000488908 HIPK2Q9H2X6 1198 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 POT1Q9NUX5 634 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 PROCRQ9UNN8 238 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 CFAP20Q9Y6A4 193 aaKnown RBP3.65□□□□□ -1.83
CCDC93-209ENST00000488908 NOTCH4Q99466 2003 aa3.65□□□□□ -1.83
CCDC93-209ENST00000488908 A1L4Q6 167 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 PRSS44E7EML9 344 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 H3BNX3 289 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 M0QYG6 137 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 KRT86O43790 486 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 PDE8BO95263 885 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 DLDP09622 509 aaKnown RBP3.64□□□□□ -1.83
CCDC93-209ENST00000488908 FTH1P19P0C7X4 201 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 MT3P25713 68 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 PPIFP30405 207 aaKnown RBP3.64□□□□□ -1.83
CCDC93-209ENST00000488908 PHKA1P46020 1223 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 LOXL3P58215 753 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 SP2Q02086 613 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 HYAL1Q12794 435 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 BOP1Q14137 746 aaKnown RBP3.64□□□□□ -1.83
CCDC93-209ENST00000488908 KRT81Q14533 505 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 ACAP2Q15057 778 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 LEXMQ3ZCV2 418 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 RBMXL3Q8N7X1 1067 aaKnown RBP3.64□□□□□ -1.83
CCDC93-209ENST00000488908 ATG4AQ8WYN0 398 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 GLG1Q92896 1179 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 THOC3Q96J01 351 aaKnown RBP3.64□□□□□ -1.83
CCDC93-209ENST00000488908 CTAGE1Q96RT6 745 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 TFCP2L1Q9NZI6 479 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 ZDHHC8Q9ULC8 765 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 SQORQ9Y6N5 450 aa3.64□□□□□ -1.83
CCDC93-209ENST00000488908 SMAD6O43541 496 aaKnown RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 CRYABP02511 175 aaKnown RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 HOXD9P28356 352 aaPredicted RBP3.63□□□□□ -1.83
CCDC93-209ENST00000488908 PRDX5P30044 214 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms