RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ST6GALNAC4Q9H4F1 302 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 SSU72Q9NP77 194 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 POLKQ9UBT6 870 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 NLRC5Q86WI3 1866 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MYO5AQ9Y4I1 1855 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 PODXLO00592 558 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 PHGDHO43175 533 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 AHSGP02765 367 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 SPATA31C1P0DKV0 1188 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TGM1P22735 817 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MCAMP43121 646 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 CCR9P51686 369 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TLE2Q04725 743 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TMEM132BQ14DG7 1078 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TARBP2Q15633 366 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 MAN2A1Q16706 1144 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 FAM47CQ5HY64 1035 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 FYB2Q5VWT5 728 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 E4F1Q66K89 784 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 TTLL5Q6EMB2 1281 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 BORAQ6PGQ7 559 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ZNF765Q7L2R6 523 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 NUP54Q7Z3B4 507 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 BRSK2Q8IWQ3 736 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MFSD2AQ8NA29 543 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TRIM63Q969Q1 353 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MEGF10Q96KG7 1140 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MRGPRX4Q96LA9 322 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 COG8Q96MW5 612 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 C1orf43Q9BWL3 253 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 PCIF1Q9H4Z3 704 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 CHST7Q9NS84 486 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 SEPT11Q9NVA2 429 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 ARHGAP26Q9UNA1 814 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ZNFX1Q9P2E3 1918 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 NT5C1B-RDH14C9J2C7 533 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 KIAA0355O15063 1070 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TNFRSF8P28908 595 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TPP2P29144 1249 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 MAP2K2P36507 400 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 MLH1P40692 756 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 YBX1P67809 324 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 ACVR2BQ13705 512 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TBCEQ15813 527 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 ARHGAP44Q17R89 818 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 CFAP58Q5T655 872 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZPBP2Q6X784 338 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZNF783Q6ZMS7 281 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 GAREM2Q75VX8 874 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TXLNBQ8N3L3 684 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 KCTD6Q8NC69 237 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 WFDC12Q8WWY7 111 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 LRRC46Q96FV0 321 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TCTN2Q96GX1 697 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 JMJD4Q9H9V9 463 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZNF287Q9HBT7 754 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ADAMTS8Q9UP79 889 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 U3KQE9 123 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 CA12O43570 354 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 UBASH3AP57075 661 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 UBE3AQ05086 875 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 EFR3AQ14156 821 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 VWA3BQ502W6 1294 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 PRRT3Q5FWE3 981 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 SZRD1Q7Z422 152 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZZZ3Q8IYH5 903 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 Q8N1Y9 231 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZGPATQ8N5A5 531 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 GOT1L1Q8NHS2 421 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 PIP4K2CQ8TBX8 421 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 RNF141Q8WVD5 230 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 GPR63Q9BZJ6 419 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TWSG1Q9GZX9 223 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 CCDC68Q9H2F9 335 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMC6-208ENST00000481708 SEL1LQ9UBV2 794 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 HMX3A6NHT5 357 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 PRSS29PA6NIE9 313 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 FAM47E-STBD1D6RA91 191 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 H0Y3Z8 333 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ADAM20O43506 726 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 USP2O75604 605 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 C4BPAP04003 597 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 CKBP12277 381 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ATF7P17544 494 aaPredicted RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 CD40P25942 277 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ICAM3P32942 547 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 WASP42768 502 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 ZNF132P52740 706 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 LASP1Q14847 261 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 GPR19Q15760 415 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 PRICKLE4Q2TBC4 344 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 TMTC4Q5T4D3 741 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 RAP1GAP2Q684P5 730 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 KIAA0408Q6ZU52 694 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 R3HCC1LQ7Z5L2 792 aaKnown RBP3.68□□□□□ -1.82
SMC6-208ENST00000481708 THAP5Q7Z6K1 395 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 RAB11FIP4Q86YS3 637 aa3.68□□□□□ -1.82
SMC6-208ENST00000481708 EPHX4Q8IUS5 362 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms