RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 KAT6BQ8WYB5 2073 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 CYSRT1A8MQ03 144 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 TRIM24O15164 1050 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 SCAF4O95104 1147 aaKnown RBP6.26□□□□□ -1.41
CCDC171-207ENST00000478913 GNAI3P08754 354 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 SLC6A2P23975 617 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 PRDX5P30044 214 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 PIK3CGP48736 1102 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 GNAI1P63096 354 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 NKX6-1P78426 367 aaPredicted RBP6.26□□□□□ -1.41
CCDC171-207ENST00000478913 NRN1LQ496H8 165 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 CCDC93Q567U6 631 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 AOPEPQ8N6M6 819 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 USP38Q8NB14 1042 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 EXTL1Q92935 676 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 ASB2Q96Q27 587 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 HTATIP2Q9BUP3 242 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 B3GNT5Q9BYG0 378 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 FAM204AQ9H8W3 233 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 ARMT1Q9H993 441 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 SLAMF7Q9NQ25 335 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 PARPBPQ9NWS1 579 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 DDX20Q9UHI6 824 aaKnown RBP6.26□□□□□ -1.41
CCDC171-207ENST00000478913 CPDO75976 1380 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 ALS2Q96Q42 1657 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 QRICH2Q9H0J4 1663 aa6.26□□□□□ -1.41
CCDC171-207ENST00000478913 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 CLTCL1P53675 1640 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 FASNP49327 2511 aaKnown RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 MAST4O15021 2626 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 DIRC3C9JPN6 131 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 FAM227AF5H4B4 570 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 SLC43A1O75387 559 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 TUSC2O75896 110 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GCP02774 474 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 SLC6A4P31645 630 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 RNASE9P60153 205 aaKnown RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 RAB1AP62820 205 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 TOB2Q14106 344 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GBX1Q14549 363 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 PLS1Q14651 629 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GRM3Q14832 879 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 ANO6Q4KMQ2 910 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 RABL3Q5HYI8 236 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 FAM109BQ6ICB4 259 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF365Q70YC5 407 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GDF7Q7Z4P5 450 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 TBC1D15Q8TC07 691 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 CPT1CQ8TCG5 803 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 BRIX1Q8TDN6 353 aaKnown RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 C1orf43Q9BWL3 253 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GLIS2Q9BZE0 524 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 TMEM60Q9H2L4 133 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 TRPM5Q9NZQ8 1165 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 USP15Q9Y4E8 981 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-207ENST00000478913 PCDHA1Q9Y5I3 950 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 GPR179Q6PRD1 2367 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF541Q9H0D2 1346 aa6.25□□□□□ -1.41
CCDC171-207ENST00000478913 CHD6Q8TD26 2715 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 FLNBO75369 2602 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 USP47Q96K76 1375 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 A0A088AWK7 358 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 FAM20BO75063 409 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 ADRB1P08588 477 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 SPATA31D3P0C874 917 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 FOSL2P15408 326 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 FAM102AQ5T9C2 384 aaPredicted RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 PPP4R4Q6NUP7 873 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 NPNTQ6UXI9 565 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 SPATA31D4Q6ZUB0 917 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 DGKHQ86XP1 1220 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 FAM90A1Q86YD7 464 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 RHOT2Q8IXI1 618 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 TDHQ8IZJ6 230 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 SH3RF3Q8TEJ3 882 aaPredicted RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 TNPO1Q92973 898 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 GPR20Q99678 358 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 GDF15Q99988 308 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 MRPL46Q9H2W6 279 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 BRD9Q9H8M2 597 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 SARS2Q9NP81 518 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 GEMIN8Q9NWZ8 242 aaKnown RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 CFAP97Q9P2B7 532 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 ATP11BQ9Y2G3 1177 aa6.24□□□□□ -1.41
CCDC171-207ENST00000478913 TRPM3Q9HCF6 1732 aaPredicted RBP6.24□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF318Q5VUA4 2279 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 CRYBG1Q9Y4K1 1723 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 MED19A0JLT2 244 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-207ENST00000478913 GRXCR1A8MXD5 290 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 AGFG2O95081 481 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 PRSS23O95084 383 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 CKBP12277 381 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms