RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 EAPPQ56P03 285 aaPredicted RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 ARMC3Q5W041 872 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 KLC3Q6P597 504 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 ADGRD1Q6QNK2 874 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 RHOT1Q8IXI2 618 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 EXD1Q8NHP7 514 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 DHRS4Q9BTZ2 278 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 OCEL1Q9H607 264 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 TMEM206Q9H813 350 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 PREBQ9HCU5 417 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 FRMD4AQ9P2Q2 1039 aaPredicted RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 A0A1W2PPM1 405 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 CYP26A1O43174 497 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 ITGA2BP08514 1039 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 DLDP09622 509 aaKnown RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 DHRS4L1P0CG22 281 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 MAPTP10636 758 aaKnown RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 PIK3CAP42336 1068 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 PRKD1Q15139 912 aaPredicted RBP16■□□□□ 0.15
CLSTN1-205ENST00000477264 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 RIPOR1Q6ZS17 1223 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 TRIM42Q8IWZ5 723 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 BANPQ8N9N5 519 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 ATP11CQ8NB49 1132 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 KCNK13Q9HB14 408 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 KCNK4Q9NYG8 393 aa16■□□□□ 0.15
CLSTN1-205ENST00000477264 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 MEIS2O14770 477 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 MSH4O15457 936 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 AP1G1O43747 822 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 PROSCO94903 275 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 STAT2P52630 851 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 MCCD1P59942 119 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 OVGP1Q12889 678 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 MED21Q13503 144 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 SLC47A2Q86VL8 602 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 PDSS2Q86YH6 399 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 SULF1Q8IWU6 871 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 UIMC1Q96RL1 719 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 C1orf21Q9H246 121 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 IKZF4Q9H2S9 585 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 PLA2G4CQ9UP65 541 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 FAM170AA1A519 330 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 SPECC1L-ADORA2AF8WAN1 911 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 IPO5O00410 1097 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 CYP3A4P08684 503 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 FDX1P10109 184 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 CFAP157Q5JU67 520 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 TCP10LQ8TDR4 215 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 KREMEN1Q96MU8 473 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 WRNIP1Q96S55 665 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 DDX50Q9BQ39 737 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 FBXO6Q9NRD1 293 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 TAGLN3Q9UI15 199 aa15.99■□□□□ 0.15
CLSTN1-205ENST00000477264 B2RBV5 119 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 BUD23O43709 281 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 OPHN1O60890 802 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 RNASEH1O60930 286 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 UQCRBP14927 111 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 USP46P62068 366 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 ULK2Q8IYT8 1036 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 JADE3Q92613 823 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 GFM2Q969S9 779 aaKnown RBP15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 CATSPER2Q96P56 530 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 ACSS3Q9H6R3 686 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 PICK1Q9NRD5 415 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
CLSTN1-205ENST00000477264 CAPN14A8MX76 684 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 LIASO43766 372 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 GCLMP48507 274 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 SULT2A1Q06520 285 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 DHDDSQ86SQ9 333 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 ZNF677Q86XU0 584 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 ZBED8Q8IZ13 594 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 MCOLN2Q8IZK6 566 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 PPM1KQ8N3J5 372 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 ALLCQ8N6M5 410 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 MZB1Q8WU39 189 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 FAM172AQ8WUF8 416 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 DDX1Q92499 740 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 PANX3Q96QZ0 392 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 WWP1Q9H0M0 922 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 BCAS3Q9H6U6 928 aa15.97■□□□□ 0.15
CLSTN1-205ENST00000477264 DRG1Q9Y295 367 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms