RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 OSBPL6Q9BZF3 934 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 ELOVL4Q9GZR5 314 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 KIF9Q9HAQ2 790 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 TRPV5Q9NQA5 729 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 NXF1Q9UBU9 619 aaKnown RBP10.91□□□□□ -0.66
CCM2-208ENST00000476594 MAGED2Q9UNF1 606 aaPredicted RBP10.91□□□□□ -0.66
CCM2-208ENST00000476594 SIT1Q9Y3P8 196 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 DOCK6Q96HP0 2047 aa10.91□□□□□ -0.66
CCM2-208ENST00000476594 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 KRBA1A5PL33 1030 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 HEPACAM2A8MVW5 462 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 CHADO15335 359 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 MOSPD3O75425 235 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 PDGFRBP09619 1106 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 GLULP15104 373 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 GJA1P17302 382 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 GDI1P31150 447 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 GTF2H1P32780 548 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 GRIK1P39086 918 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 PPP3CCP48454 512 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 NHLH1Q02575 133 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 LRRC63Q05C16 580 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 PNOCQ13519 176 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ZACNQ401N2 412 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 COBLL1Q53SF7 1204 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 TDRD10Q5VZ19 366 aaKnown RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 FAM171BQ6P995 826 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ZNF852Q6ZMS4 543 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 LIMS2Q7Z4I7 341 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 OSTM1Q86WC4 334 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 CCDC105Q8IYK2 499 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 TTC39CQ8N584 583 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 CELF5Q8N6W0 485 aaKnown RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 TMEM105Q8N8V8 129 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 MYCBPAPQ8TBZ2 947 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 KBTBD7Q8WVZ9 684 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ATOH1Q92858 354 aaPredicted RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 SPATA17Q96L03 361 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 RPP25Q9BUL9 199 aaKnown RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 LRRC3Q9BY71 257 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 ZNF334Q9HCZ1 680 aaPredicted RBP10.9□□□□□ -0.66
CCM2-208ENST00000476594 CHMP5Q9NZZ3 219 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.66
CCM2-208ENST00000476594 KMT2EQ8IZD2 1858 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 NOTCH4Q99466 2003 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 MYBPHLA2RUH7 354 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 SLC16A3O15427 465 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 NOL4O94818 638 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 NPR3P17342 541 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 PFKLP17858 780 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 FCARP24071 287 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 CYP2F1P24903 491 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 CASP4P49662 377 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 NLRP12P59046 1061 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 PSMC1P62191 440 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 CYP4F8P98187 520 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 FKBP3Q00688 224 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 AMPD2Q01433 879 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 GRM2Q14416 872 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 DDR2Q16832 855 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 IER5LQ5T953 404 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 CC2D1AQ6P1N0 951 aaPredicted RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 VITQ6UXI7 678 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 TPRG1Q6ZUI0 275 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 DENND5BQ6ZUT9 1274 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 UNC93AQ86WB7 457 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 CMTM8Q8IZV2 173 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 DTWD2Q8NBA8 298 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 B3GALNT2Q8NCR0 500 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 PRSS33Q8NF86 280 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 ST13P5Q8NFI4 369 aaPredicted RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 PJA1Q8NG27 643 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 BPIFB1Q8TDL5 484 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 FAXDC2Q96IV6 333 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 FAM84AQ96KN4 292 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 MYRFLQ96LU7 910 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 PKMYT1Q99640 499 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 IER2Q9BTL4 223 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 XYLT2Q9H1B5 865 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
CCM2-208ENST00000476594 TMEM8AQ9HCN3 771 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 TMLHEQ9NVH6 421 aa10.89□□□□□ -0.67
CCM2-208ENST00000476594 TRAV19A0A0A6YYK7 116 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 AKAP3O75969 853 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 HLA-DRAP01903 254 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms