RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 NRLP54845 237 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 MTAPQ13126 283 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
VARS-223ENST00000474643 SCN4BQ8IWT1 228 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 TOP6BLQ8N6T0 577 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 CELF5Q8N6W0 485 aaKnown RBP16.2■□□□□ 0.18
VARS-223ENST00000474643 XXYLT1Q8NBI6 393 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 BPIFB1Q8TDL5 484 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 BORCS6Q96GS4 357 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 HPDLQ96IR7 371 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 TRPC7Q9HCX4 862 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 INTS13Q9NVM9 706 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 ZSCAN32Q9NX65 697 aa16.2■□□□□ 0.18
VARS-223ENST00000474643 TICRRQ7Z2Z1 1910 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 RIF1Q5UIP0 2472 aaKnown RBP16.19■□□□□ 0.18
VARS-223ENST00000474643 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
VARS-223ENST00000474643 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.18
VARS-223ENST00000474643 CCR3P51677 355 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 FCHO2Q0JRZ9 810 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 SNRNP35Q16560 246 aaKnown RBP16.19■□□□□ 0.18
VARS-223ENST00000474643 INTS6LQ5JSJ4 861 aaKnown RBP16.19■□□□□ 0.18
VARS-223ENST00000474643 TSSK4Q6SA08 328 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 C4orf50Q6ZRC1 276 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 CBWD2Q8IUF1 395 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 WDR49Q8IV35 697 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 ERCC4Q92889 916 aaPredicted RBP16.19■□□□□ 0.18
VARS-223ENST00000474643 ZFYVE19Q96K21 471 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 GSDMAQ96QA5 445 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 ABCB6Q9NP58 842 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 OBP2AQ9NY56 170 aa16.19■□□□□ 0.18
VARS-223ENST00000474643 PRAMEF12O95522 483 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 ANXA13P27216 316 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 ID4P47928 161 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 SOX9P48436 509 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 WNT7BP56706 349 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 TNNC1P63316 161 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 TRPC3Q13507 836 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 MAPRE1Q15691 268 aaKnown RBP16.18■□□□□ 0.18
VARS-223ENST00000474643 DDR2Q16832 855 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
VARS-223ENST00000474643 CMTM8Q8IZV2 173 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 RSPRY1Q96DX4 576 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 FAM84AQ96KN4 292 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 FAM126AQ9BYI3 521 aaPredicted RBP16.18■□□□□ 0.18
VARS-223ENST00000474643 SMG9Q9H0W8 520 aaKnown RBP16.18■□□□□ 0.18
VARS-223ENST00000474643 CHRDQ9H2X0 955 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 GDAP2Q9NXN4 497 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 GTSE1Q9NYZ3 720 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 PCDHA5Q9Y5H7 936 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 FAM186AA6NE01 2351 aa16.18■□□□□ 0.18
VARS-223ENST00000474643 SPECC1L-ADORA2AF8WAN1 911 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 PDXKO00764 312 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 PHACTR2O75167 634 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 CKMP06732 381 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 CYP2F1P24903 491 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 CXCL12P48061 93 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 GPR15P49685 360 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 NLRP12P59046 1061 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 AMPD2Q01433 879 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 CYP27A1Q02318 531 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 ITPRIPL2Q3MIP1 535 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 SDHAF4Q5VUM1 108 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 SMYD4Q8IYR2 804 aaPredicted RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 MAML2Q8IZL2 1156 aaPredicted RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 OR5B17Q8NGF7 314 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 SYT15Q9BQS2 421 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 GTPBP4Q9BZE4 634 aaKnown RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 KIF9Q9HAQ2 790 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 TMLHEQ9NVH6 421 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 MAGEC2Q9UBF1 373 aaPredicted RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 SMG5Q9UPR3 1016 aaKnown RBP16.17■□□□□ 0.18
VARS-223ENST00000474643 NCANO14594 1321 aa16.17■□□□□ 0.18
VARS-223ENST00000474643 NR3C1P04150 777 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 CTHP32929 405 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 GRIK1P39086 918 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 MLLT6P55198 1093 aaPredicted RBP16.16■□□□□ 0.18
VARS-223ENST00000474643 PSMC1P62191 440 aaKnown RBP16.16■□□□□ 0.18
VARS-223ENST00000474643 STIM1Q13586 685 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 DGKKQ5KSL6 1271 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 TXNDC8Q6A555 127 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
VARS-223ENST00000474643 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 FUBP3Q96I24 572 aaKnown RBP eCLIP16.16■□□□□ 0.18
VARS-223ENST00000474643 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 SLC46A2Q9BY10 475 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms