RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 HUS1O60921 280 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 TADA3O75528 432 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 NOL4O94818 638 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 EPN2O95208 641 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 ITGB3P05106 788 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 CCDC192P0DO97 292 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 GJA4P35212 333 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 LIMK1P53667 647 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 BRSK2Q8IWQ3 736 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 TMEM86AQ8N2M4 240 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 FAM84AQ96KN4 292 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 ECT2Q9H8V3 914 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-207ENST00000469093 TSC2P49815 1807 aa13.16□□□□□ -0.3
COL5A1-207ENST00000469093 KMT2BQ9UMN6 2715 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GABRDO14764 452 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 HCRTO43612 131 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 AKAP3O75969 853 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GCNT3O95395 438 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GAP43P17677 238 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GARTP22102 1010 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 CASP5P51878 434 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 RBP5P82980 135 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 MYL7Q01449 175 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 MTF1Q14872 753 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 PLK5Q496M5 336 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 FBXO43Q4G163 708 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 RRAGBQ5VZM2 374 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 IL31Q6EBC2 164 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 C12orf50Q8NA57 414 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 CLIC6Q96NY7 704 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 RBAKQ9NYW8 714 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 SIX4Q9UIU6 781 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
COL5A1-207ENST00000469093 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
COL5A1-207ENST00000469093 DENND4CQ5VZ89 1909 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 ATP2C2O75185 946 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 KRT19P08727 400 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 LHX1P48742 406 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 ZNF77Q15935 545 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-207ENST00000469093 STPG1Q5TH74 334 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 SPATA2LQ8IUW3 424 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-207ENST00000469093 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 CPA6Q8N4T0 437 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 TOP6BLQ8N6T0 577 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 ARL14EPQ8N8R7 260 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-207ENST00000469093 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 SPATA18Q8TC71 538 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 SMOC1Q9H4F8 434 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 TMEM206Q9H813 350 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 PCDHGA5Q9Y5G8 931 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 WNT6Q9Y6F9 365 aa13.14□□□□□ -0.31
COL5A1-207ENST00000469093 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
COL5A1-207ENST00000469093 TRAV19A0A0A6YYK7 116 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 C2orf78A6NCI8 922 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 DCLK1O15075 740 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 CKMP06732 381 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 IDEP14735 1019 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 HDCP19113 662 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 KCNA4P22459 653 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms