RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 FGF19O95750 216 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 F11P03951 625 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 KRT13P13646 458 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 PSMC3P17980 439 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 GDI1P31150 447 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 GRIK1P39086 918 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 TCF15Q12870 199 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 NFIL3Q16649 462 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 SGSM1Q2NKQ1 1148 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 ZACNQ401N2 412 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 GCNAQ96QF7 691 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 SLC46A2Q9BY10 475 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 FOXQ1Q9C009 403 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 KCNH6Q9H252 994 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 TASP1Q9H6P5 420 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 BRD9Q9H8M2 597 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 ABCB6Q9NP58 842 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 MTF2Q9Y483 593 aaPredicted RBP12.33□□□□□ -0.44
CDHR3-205ENST00000468143 DOCK8Q8NF50 2099 aa12.33□□□□□ -0.44
CDHR3-205ENST00000468143 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 DPYSL4O14531 572 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 IKBKBO14920 756 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 ZNF263O14978 683 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 CETN3O15182 167 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MAPK13O15264 365 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 CSH1P0DML2 217 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 CSH2P0DML3 217 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 CDC25CP30307 473 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 PIK3CAP42336 1068 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 NLRP12P59046 1061 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 STARD6P59095 220 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 PFKPQ01813 784 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 NHLH1Q02575 133 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 ORC1Q13415 861 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MAPRE1Q15691 268 aaKnown RBP12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
CDHR3-205ENST00000468143 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MFSD6LQ8IWD5 586 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 ADSSL1Q8N142 457 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 FUBP3Q96I24 572 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDHR3-205ENST00000468143 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 B3GNT5Q9BYG0 378 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 TRPV4Q9HBA0 871 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 SIT1Q9Y3P8 196 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
CDHR3-205ENST00000468143 BIN1O00499 593 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
CDHR3-205ENST00000468143 NOL4O94818 638 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 PRAMEF12O95522 483 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
CDHR3-205ENST00000468143 MAGEA11P43364 429 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 PTPN5P54829 565 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 EDRF1Q3B7T1 1238 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 PHLDB3Q6NSJ2 640 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 TPRG1Q6ZUI0 275 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 ACOT1Q86TX2 421 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 SHDQ96IW2 340 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 PRRX2Q99811 253 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 TSG101Q99816 390 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
CDHR3-205ENST00000468143 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
CDHR3-205ENST00000468143 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 FAM170BA6NMN3 283 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 F8VP50 259 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
CDHR3-205ENST00000468143 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
CDHR3-205ENST00000468143 ANXA13P27216 316 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
CDHR3-205ENST00000468143 ASPAP45381 313 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 NDST1P52848 882 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 USP46P62068 366 aa12.3□□□□□ -0.44
CDHR3-205ENST00000468143 PRKCQQ04759 706 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms