RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF700Q9H0M5 742 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 ARPP21Q9UBL0 812 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-211ENST00000466054 CDYLQ9Y232 598 aa5.3□□□□□ -1.56
LRCH3-211ENST00000466054 E7ENX8 843 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 TRIM38O00635 465 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 SOAT2O75908 522 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 DNAJB5O75953 348 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 GPD1P21695 349 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 TAP2Q03519 686 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 SCAPQ12770 1279 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 PICALMQ13492 652 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 CNGA2Q16280 664 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 AMOTQ4VCS5 1084 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 SLC44A4Q53GD3 710 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 KLHL22Q53GT1 634 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 PPP1R32Q7Z5V6 425 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 TMEM132CQ8N3T6 1108 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 BOD1Q96IK1 185 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 P2RX7Q99572 595 aaKnown RBP5.29□□□□□ -1.56
LRCH3-211ENST00000466054 CPNE5Q9HCH3 593 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 TMEM74BQ9NUR3 256 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 AGAP1Q9UPQ3 857 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 FAM50BQ9Y247 325 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 PCDHGB6Q9Y5F9 930 aa5.29□□□□□ -1.56
LRCH3-211ENST00000466054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRCH3-211ENST00000466054 ARHGEF17Q96PE2 2063 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 USP19O94966 1318 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 CCDC195A0A1B0GUA6 201 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 MANSC4A6NHS7 340 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 APAF1O14727 1248 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 TBX3O15119 743 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 TBC1D4O60343 1298 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 PQBP1O60828 265 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 ERN1O75460 977 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 CELA2AP08217 269 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 ELANEP08246 267 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 PIM1P11309 404 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 BRAFP15056 766 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 KCNA2P16389 499 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 PROK1P58294 105 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 HSD11B2P80365 405 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 HDAC1Q13547 482 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 FAM160B1Q5W0V3 765 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 B3GNTL1Q67FW5 361 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 LMBRD2Q68DH5 695 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 PHKBQ93100 1093 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 NMD3Q96D46 503 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 PTCD3Q96EY7 689 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 MSLNLQ96KJ4 702 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 MOGAT1Q96PD6 335 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 TRIB1Q96RU8 372 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 ZSWIM1Q9BR11 485 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 ZNF287Q9HBT7 754 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 GALNT9Q9HCQ5 603 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 ETAA1Q9NY74 926 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 HSFX1Q9UBD0 423 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 OGDHLQ9ULD0 1010 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 MTO1Q9Y2Z2 717 aaKnown RBP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.28□□□□□ -1.56
LRCH3-211ENST00000466054 AATKQ6ZMQ8 1374 aa5.28□□□□□ -1.56
LRCH3-211ENST00000466054 A0A1W2PS29 197 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 M0QYG6 137 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 BTN3A1O00481 513 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 PMM2O15305 246 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 UNC5CO95185 931 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 GRPP07492 148 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 SLC5A1P13866 664 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 CCT4P50991 539 aaKnown RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 SUMO3P55854 103 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 CXADRP78310 365 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 FMO1Q01740 532 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 SLC13A2Q13183 592 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 IFIT5Q13325 482 aaKnown RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 RAB32Q13637 225 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 FHL1Q13642 323 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 TAPT1Q6NXT6 567 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 CLNKQ7Z7G1 428 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 Q8NA96 180 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 PCSK9Q8NBP7 692 aaKnown RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 FAM46DQ8NEK8 389 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 POC1BQ8TC44 478 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 HASPINQ8TF76 798 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 ZNF518BQ9C0D4 1074 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 SMURF2Q9HAU4 748 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 HESX1Q9UBX0 185 aa5.27□□□□□ -1.57
LRCH3-211ENST00000466054 RGS17Q9UGC6 210 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 AFF4Q9UHB7 1163 aaKnown RBP5.27□□□□□ -1.57
LRCH3-211ENST00000466054 SPATA31A3Q5VYP0 1347 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 A0A087WWL8 130 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 PRAMEF33A0A0G2JMD5 474 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 CCDC78A2IDD5 438 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 MYO1CO00159 1063 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 PRAMEF10O60809 474 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 KIF20AO95235 890 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 MAP4K4O95819 1239 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms