RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ZC3H14Q6PJT7 736 aaKnown RBP20.29■□□□□ 0.84
VARS-220ENST00000461874 CMTM8Q8IZV2 173 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 KIAA0895Q8NCT3 520 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 BPIFB1Q8TDL5 484 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 ZNF516Q92618 1163 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 MMS19Q96T76 1030 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 SYT15Q9BQS2 421 aa20.29■□□□□ 0.84
VARS-220ENST00000461874 MAGED2Q9UNF1 606 aaPredicted RBP20.29■□□□□ 0.84
VARS-220ENST00000461874 FAM237AA0A1B0GTK4 181 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 SOBPA7XYQ1 873 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 NOL4O94818 638 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 MYL1P05976 194 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 FAM163BP0C2L3 166 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 CCNE1P24864 410 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 DDX6P26196 483 aaKnown RBP eCLIP20.28■□□□□ 0.84
VARS-220ENST00000461874 MAGEA11P43364 429 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 C4orf50Q6ZRC1 276 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 CELF5Q8N6W0 485 aaKnown RBP20.28■□□□□ 0.84
VARS-220ENST00000461874 MSANTD3Q96H12 275 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 ZFYVE19Q96K21 471 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 MYRFLQ96LU7 910 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 SMG9Q9H0W8 520 aaKnown RBP20.28■□□□□ 0.84
VARS-220ENST00000461874 C8orf33Q9H7E9 229 aaPredicted RBP20.28■□□□□ 0.84
VARS-220ENST00000461874 CRTAC1Q9NQ79 661 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 DMAC2Q9NW81 257 aa20.28■□□□□ 0.84
VARS-220ENST00000461874 SLC38A8A6NNN8 435 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 LMNAP02545 664 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 PDGFRBP09619 1106 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 SYKP43405 635 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 KPNA1P52294 538 aaPredicted RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 CSTF1Q05048 431 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 MTAPQ13126 283 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 MAPRE1Q15691 268 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 TXNDC8Q6A555 127 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 C1orf228Q6PIY5 440 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 MON1AQ86VX9 555 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 ADSSL1Q8N142 457 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 MAB21L3Q8N8X9 362 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 PLEKHO2Q8TD55 490 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 TMEM174Q8WUU8 243 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 TRMT2BQ96GJ1 504 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 MRPL45Q9BRJ2 306 aaKnown RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 CHRDQ9H2X0 955 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 LMAN1LQ9HAT1 526 aa20.27■□□□□ 0.84
VARS-220ENST00000461874 MAGEC2Q9UBF1 373 aaPredicted RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 UXTQ9UBK9 157 aaPredicted RBP20.27■□□□□ 0.84
VARS-220ENST00000461874 COL4A2P08572 1712 aa20.27■□□□□ 0.83
VARS-220ENST00000461874 TACC1O75410 805 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 STAU1O95793 577 aaKnown RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 GNL1P36915 607 aaPredicted RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 AVPR1AP37288 418 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 SOX9P48436 509 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 CASP4P49662 377 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 NDUFA8P51970 172 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 MYL6P60660 151 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 TRPC3Q13507 836 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 WDR72Q3MJ13 1102 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 MAMSTRQ6ZN01 415 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 SLC9A9Q8IVB4 645 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 SCN4BQ8IWT1 228 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 MYLPFQ96A32 169 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 XYLT2Q9H1B5 865 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 SNX25Q9H3E2 840 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 PRMT8Q9NR22 394 aaPredicted RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 THG1LQ9NWX6 298 aaKnown RBP20.26■□□□□ 0.83
VARS-220ENST00000461874 GTSE1Q9NYZ3 720 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 CCL26Q9Y258 94 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
VARS-220ENST00000461874 TADA3O75528 432 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 CHRNB1P11230 501 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 ATICP31939 592 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 TNNC1P63316 161 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 CLDN10P78369 228 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 VSTM1Q6UX27 236 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 RALGPS2Q86X27 583 aaPredicted RBP20.25■□□□□ 0.83
VARS-220ENST00000461874 TTC8Q8TAM2 541 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 IER2Q9BTL4 223 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 TDP1Q9NUW8 608 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 NME7Q9Y5B8 376 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 GPR179Q6PRD1 2367 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 WDR87Q6ZQQ6 2873 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
VARS-220ENST00000461874 A0A1W2PQ27 194 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 A0A1W2PQ64 194 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 A0A1W2PQD8 194 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 SPECC1L-ADORA2AF8WAN1 911 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 PDXKO00764 312 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 RPN1P04843 607 aaKnown RBP20.24■□□□□ 0.83
VARS-220ENST00000461874 BDNFP23560 247 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 CTHP32929 405 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 AP3M2P53677 418 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms