RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 JOSD2Q8TAC2 188 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 RSPH1Q8WYR4 309 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 RFFLQ8WZ73 363 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 NDRG1Q92597 394 aaKnown RBP9.27□□□□□ -0.93
RIF1-208ENST00000457745 BADQ92934 168 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 HEXIM2Q96MH2 286 aaKnown RBP9.27□□□□□ -0.93
RIF1-208ENST00000457745 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 PSMB7Q99436 277 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 NUP85Q9BW27 656 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 FTHL17Q9BXU8 183 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 B3GNT5Q9BYG0 378 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 ADAM33Q9BZ11 813 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 GPR62Q9BZJ7 368 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 ELAC1Q9H777 363 aaKnown RBP9.27□□□□□ -0.93
RIF1-208ENST00000457745 ABCB6Q9NP58 842 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.93
RIF1-208ENST00000457745 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
RIF1-208ENST00000457745 GOLGA6L9A6NEM1 432 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 M0QZQ0 153 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 NRP1O14786 923 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 DDX3YO15523 660 aaKnown RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 CCP110O43303 1012 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 XPOTO43592 962 aaKnown RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 KRT86O43790 486 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 KIF5CO60282 957 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 MTA2O94776 668 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 VNN2O95498 520 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 EFEMP2O95967 443 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 GNL1P36915 607 aaPredicted RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 OR1G1P47890 313 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 DNA2P51530 1060 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 BPIFB4P59827 614 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 RPL7AP62424 266 aaKnown RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 PDE4CQ08493 712 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 TCEAL1Q15170 157 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 TAF5Q15542 800 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 DCAF12L1Q5VU92 463 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ARHGAP17Q68EM7 881 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 MFSD5Q6N075 450 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 AADACL2Q6P093 401 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 PMF1Q6P1K2 205 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 LCLAT1Q6UWP7 414 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 DSTYKQ6XUX3 929 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ANKS1BQ7Z6G8 1248 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 SLFN11Q7Z7L1 901 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ZNF677Q86XU0 584 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 HACE1Q8IYU2 909 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 TTC9BQ8N6N2 239 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 APPL2Q8NEU8 664 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 SLC2A14Q8TDB8 520 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ALG3Q92685 438 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 KRT35Q92764 455 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 APBB2Q92870 758 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 FAXDC2Q96IV6 333 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 SYT15Q9BQS2 421 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 HERPUD2Q9BSE4 406 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ZNF518BQ9C0D4 1074 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 L2HGDHQ9H9P8 463 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 DDX43Q9NXZ2 648 aaKnown RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 GTF3C4Q9UKN8 822 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 INTUQ9ULD6 942 aa9.26□□□□□ -0.93
RIF1-208ENST00000457745 ZMYND8Q9ULU4 1186 aaPredicted RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
RIF1-208ENST00000457745 GBF1Q92538 1859 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 PLXNA4Q9HCM2 1894 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 A0A0A6YYK5 440 aaPredicted RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 GOLGA8SH3BPF8 625 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 ADAM12O43184 909 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 DGKIO75912 1065 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 URI1O94763 535 aaPredicted RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 IPO7O95373 1038 aaKnown RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 CYP11A1P05108 521 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 GALTP07902 379 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 CCDC172P0C7W6 258 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 SKIP12755 728 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 RAG1P15918 1043 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 PTPN1P18031 435 aaKnown RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 CASQ1P31415 396 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 CXCR5P32302 372 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 PBX2P40425 430 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 PNPLA4P41247 253 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 TAS2R40P59535 323 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 YWHAEP62258 255 aaKnown RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 GPC5P78333 572 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 PDCLQ13371 301 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 MAMLD1Q13495 774 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 CNGA2Q16280 664 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 SGO2Q562F6 1265 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 DNTTIP2Q5QJE6 756 aaKnown RBP9.25□□□□□ -0.93
RIF1-208ENST00000457745 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
RIF1-208ENST00000457745 PAPD7Q5XG87 772 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms