RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FRMD5Q7Z6J6 570 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 PARD3BQ8TEW8 1205 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 MRPS31Q92665 395 aaKnown RBP21.47■■□□□ 1.03
LRCH3-208ENST00000443727 RSPRY1Q96DX4 576 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 MRPL45Q9BRJ2 306 aaKnown RBP21.47■■□□□ 1.03
LRCH3-208ENST00000443727 MKNK1Q9BUB5 465 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 GZF1Q9H116 711 aaPredicted RBP21.47■■□□□ 1.03
LRCH3-208ENST00000443727 DLGAP2Q9P1A6 1054 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 UXTQ9UBK9 157 aaPredicted RBP21.47■■□□□ 1.03
LRCH3-208ENST00000443727 MAPK8IP1Q9UQF2 711 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 PIAS3Q9Y6X2 628 aa21.47■■□□□ 1.03
LRCH3-208ENST00000443727 SLC38A8A6NNN8 435 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 LRRIQ3A6PVS8 624 aaPredicted RBP21.46■■□□□ 1.03
LRCH3-208ENST00000443727 TACC1O75410 805 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 GLULP15104 373 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 AVPR1AP37288 418 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 ZNF699Q32M78 642 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 C1orf210Q8IVY1 113 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 PLEKHO2Q8TD55 490 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 MYLPFQ96A32 169 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 SLC46A2Q9BY10 475 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 CRTAC1Q9NQ79 661 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 TRPV5Q9NQA5 729 aa21.46■■□□□ 1.03
LRCH3-208ENST00000443727 SPATA6Q9NWH7 488 aaPredicted RBP21.46■■□□□ 1.03
LRCH3-208ENST00000443727 THG1LQ9NWX6 298 aaKnown RBP21.46■■□□□ 1.03
LRCH3-208ENST00000443727 NDRG2Q9UN36 371 aaKnown RBP21.46■■□□□ 1.03
LRCH3-208ENST00000443727 CHADO15335 359 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 GFRA3O60609 400 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 PRAMEF12O95522 483 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 STAU1O95793 577 aaKnown RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 FAM163BP0C2L3 166 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 BDNFP23560 247 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 DDX6P26196 483 aaKnown RBP eCLIP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 TARSP26639 723 aaKnown RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 GRIK1P39086 918 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 NBL1P41271 181 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 MAGEA11P43364 429 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 KPNA1P52294 538 aaPredicted RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 FCHO2Q0JRZ9 810 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 NCOA4Q13772 614 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 ARHGAP29Q52LW3 1261 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 MDH1BQ5I0G3 518 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 TDRD10Q5VZ19 366 aaKnown RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 CMTM8Q8IZV2 173 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 CELF5Q8N6W0 485 aaKnown RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 MAB21L3Q8N8X9 362 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 TMEM174Q8WUU8 243 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 SMG9Q9H0W8 520 aaKnown RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 OBP2AQ9NY56 170 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 ZFHX2Q9C0A1 2572 aaPredicted RBP21.45■■□□□ 1.02
LRCH3-208ENST00000443727 NCANO14594 1321 aa21.45■■□□□ 1.02
LRCH3-208ENST00000443727 COL4A3Q01955 1670 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 A8MXQ7 604 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 NOL4O94818 638 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 F11P03951 625 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 ANXA13P27216 316 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 WEE1P30291 646 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 MAGEA9P43362 315 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 KCNB1Q14721 858 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 ZNF667Q5HYK9 610 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 VSTM1Q6UX27 236 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 TMEM150AQ86TG1 271 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 MYCBPAPQ8TBZ2 947 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 BPIFB1Q8TDL5 484 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 FAM3CQ92520 227 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 TRMT2BQ96GJ1 504 aaKnown RBP21.44■■□□□ 1.02
LRCH3-208ENST00000443727 XYLT2Q9H1B5 865 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 TRPC7Q9HCX4 862 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 TRAF3IP3Q9Y228 551 aa21.44■■□□□ 1.02
LRCH3-208ENST00000443727 NR2F2P24468 414 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 RPL13P26373 211 aaKnown RBP21.43■■□□□ 1.02
LRCH3-208ENST00000443727 DLG4P78352 724 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 CLDN10P78369 228 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 TXNDC8Q6A555 127 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 GUF1Q8N442 669 aaKnown RBP21.43■■□□□ 1.02
LRCH3-208ENST00000443727 TMC2Q8TDI7 906 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 NKD2Q969F2 451 aaPredicted RBP21.43■■□□□ 1.02
LRCH3-208ENST00000443727 PCED1BQ96HM7 432 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 ZFYVE19Q96K21 471 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 LRRC3BQ96PB8 259 aa21.43■■□□□ 1.02
LRCH3-208ENST00000443727 PROB1E7EW31 1015 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 LAMTOR5O43504 91 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 C4BPAP04003 597 aaKnown RBP21.42■■□□□ 1.02
LRCH3-208ENST00000443727 P4HA1P13674 534 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 PTPN1P18031 435 aaKnown RBP21.42■■□□□ 1.02
LRCH3-208ENST00000443727 CCNE1P24864 410 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 PLCB2Q00722 1185 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 SCARA5Q6ZMJ2 495 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 MON1AQ86VX9 555 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 TTC8Q8TAM2 541 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 CLDN23Q96B33 292 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 MYRFLQ96LU7 910 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 SMYD3Q9H7B4 428 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 C8orf33Q9H7E9 229 aaPredicted RBP21.42■■□□□ 1.02
LRCH3-208ENST00000443727 RMND1Q9NWS8 449 aa21.42■■□□□ 1.02
LRCH3-208ENST00000443727 SOBPA7XYQ1 873 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 ARNTLO00327 626 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 IKBKBO14920 756 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 TRIM66O15016 1216 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 KRT13P13646 458 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms