RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AMPD2Q01433 879 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 GPNMBQ14956 572 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 DAAM2Q86T65 1068 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 TOP6BLQ8N6T0 577 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 C11orf70Q9BRQ4 267 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 LHX5Q9H2C1 402 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 SNX25Q9H3E2 840 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 AVENQ9NQS1 362 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 UVRAGQ9P2Y5 699 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 ATP11BQ9Y2G3 1177 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CASTOR2A6NHX0 329 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 A8MXQ7 604 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 INPPL1O15357 1258 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 BUB1BO60566 1050 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CDH5P33151 784 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CLCNKBP51801 687 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CCL23P55773 120 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 C1QBPQ07021 282 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 TUSC3Q13454 348 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 STILQ15468 1287 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 CNGA2Q16280 664 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 MON1BQ7L1V2 547 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 LRRC57Q8N9N7 239 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 C1orf131Q8NDD1 294 aaKnown RBP8.55□□□□□ -1.04
CCDC39-201ENST00000442201 MAGEC3Q8TD91 643 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 UBXN4Q92575 508 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 PLEKHG4BQ96PX9 1271 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM161AQ9NX61 479 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 SNX12Q9UMY4 172 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 L1RE1Q9UN81 338 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 COG5Q9UP83 839 aa8.55□□□□□ -1.04
CCDC39-201ENST00000442201 O00370 1275 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 CYB561D2O14569 222 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ZSCAN9O15535 394 aaPredicted RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 MTA2O94776 668 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 TCP1P17987 556 aaKnown RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 MMP8P22894 467 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 GNL1P36915 607 aaPredicted RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 PEX26Q7Z412 305 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ACOT1Q86TX2 421 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ADGRF2Q8IZF7 708 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 URGCPQ8TCY9 931 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 SCLYQ96I15 445 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 UROC1Q96N76 676 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 TLR10Q9BXR5 811 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 CACNG4Q9UBN1 327 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 HYOU1Q9Y4L1 999 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 BRCA2P51587 3418 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ENPP3O14638 875 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ECEL1O95672 775 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 CALB1P05937 261 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 PRLRP16471 622 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 PAX3P23760 479 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 RRM1P23921 792 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 UPP1Q16831 310 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 WHAMMP3Q1A5X7 153 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 MEI1Q5TIA1 1274 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 DENND1BQ6P3S1 775 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 DSTYKQ6XUX3 929 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 LIMS2Q7Z4I7 341 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 SLFN11Q7Z7L1 901 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ERICH1Q86X53 443 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 KBTBD7Q8WVZ9 684 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 PAWRQ96IZ0 340 aaKnown RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 SENP8Q96LD8 212 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 CARD6Q9BX69 1037 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 GOLPH3Q9H4A6 298 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ELAC1Q9H777 363 aaKnown RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 ARFGAP3Q9NP61 516 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 SUN2Q9UH99 717 aa8.54□□□□□ -1.04
CCDC39-201ENST00000442201 CHORDC1Q9UHD1 332 aaPredicted RBP8.54□□□□□ -1.04
CCDC39-201ENST00000442201 M0QYV0 167 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 NCK2O43639 380 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 B3GAT3O94766 335 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 MICAL2O94851 1124 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 FSBPO95073 299 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 CYP2C18P33260 490 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 RPS6KA1Q15418 735 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 C2CD6Q53TS8 623 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 LCLAT1Q6UWP7 414 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 ABI1Q8IZP0 508 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 WDTC1Q8N5D0 677 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 MSANTD4Q8NCY6 345 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 TNIP3Q96KP6 325 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 WNT8AQ9H1J5 351 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 MRPL47Q9HD33 250 aaKnown RBP8.53□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
CCDC39-201ENST00000442201 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms