RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 AGRPO00253 132 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PER2O15055 1255 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TADA3O75528 432 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 ITGB3P05106 788 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 EIF4BP23588 611 aaKnown RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PPP2R5EQ16537 467 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PHACTR4Q8IZ21 702 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TRAPPC12Q8WVT3 735 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 USP13Q92995 863 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 CNBD2Q96M20 576 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 MAP3K14Q99558 947 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 ALDH8A1Q9H2A2 487 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PDGFCQ9NRA1 345 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 SMIM35A0A1B0GVV1 85 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PAMP19021 973 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 VAMP7P51809 220 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PTK2BQ14289 1009 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 ME3Q16798 604 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 BROXQ5VW32 411 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TMTC1Q8IUR5 882 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 RSPH1Q8WYR4 309 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 DACH2Q96NX9 599 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 SERPINI1Q99574 410 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 NDEL1Q9GZM8 345 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 CATSPERBQ9H7T0 1116 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 DNAJC17Q9NVM6 304 aaKnown RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 MBD2Q9UBB5 411 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 MYBL2P10244 700 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 SAT1P21673 171 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 NPEPPSP55786 919 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 POLR2FP61218 127 aaKnown RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 FKBP3Q00688 224 aaKnown RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 GRAMD1BQ3KR37 738 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TMEM31Q5JXX7 168 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 WDR45BQ5MNZ6 344 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 KLHL7Q8IXQ5 586 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 SPATA16Q9BXB7 569 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 OSBPL1AQ9BXW6 950 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 VPS37BQ9H9H4 285 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 POLD4Q9HCU8 107 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 GCNT4Q9P109 453 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF609O15014 1411 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 BUB1O43683 1085 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 AMHR2Q16671 573 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 DCLRE1AQ6PJP8 1040 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 PRPF39Q86UA1 669 aaKnown RBP7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 TRIM54Q9BYV2 358 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 HACD3Q9P035 362 aa7.63□□□□□ -1.19
SCN9A-202ENST00000409435 GRK2P25098 689 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GABRR2P28476 465 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ING5Q8WYH8 240 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 RPRD1AQ96P16 312 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PRRX2Q99811 253 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 DDX43Q9NXZ2 648 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CA14Q9ULX7 337 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PRR23D1E9PI22 279 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 DYRK3O43781 588 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CALB1P05937 261 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PRR23D2P0DMB1 279 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 HTR1BP28222 390 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TPI1P60174 286 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 KRT39Q6A163 491 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PI4K2AQ9BTU6 479 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CINPQ9BW66 212 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TARS2Q9BW92 718 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 INTS9Q9NV88 658 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ADGRA2Q96PE1 1338 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ENO4A6NNW6 628 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SYCE1LA8MT33 242 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 H3BM21 787 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GSTA1P08263 222 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PDHA1P08559 390 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GSTA2P09210 222 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 MAP4P27816 1152 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 MAGEA10P43363 369 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GCLMP48507 274 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 DEFA1P59665 94 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 DEFA3P59666 94 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ASPHQ12797 758 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 IRF5Q13568 498 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 FRA10AC1Q70Z53 315 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 NLRP9Q7RTR0 991 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 KREMEN2Q8NCW0 462 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 QKIQ96PU8 341 aaKnown RBP eCLIP7.62□□□□□ -1.191e-6■■■□□ 15.1
SCN9A-202ENST00000409435 LSG1Q9H089 658 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 EXO5Q9H790 373 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 FAM49BQ9NUQ9 324 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SYBUQ9NX95 663 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TBC1D14Q9P2M4 693 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PADI3Q9ULW8 664 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PASKQ96RG2 1323 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 E5RI56 91 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 OGTO15294 1046 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CSDE1O75534 798 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PYGLP06737 847 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms