RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 UVRAGQ9P2Y5 699 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 LCMT1Q9UIC8 334 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 SCINQ9Y6U3 715 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 RCCD1A6NED2 376 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 MMP8P22894 467 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 GPD2P43304 727 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 NOP2P46087 812 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 TCEAL1Q15170 157 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 NFE2Q16621 373 aaPredicted RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 GOLGA7BQ2TAP0 167 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 KIAA1841Q6NSI8 718 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 MCOLN2Q8IZK6 566 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 C1orf131Q8NDD1 294 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 SLC2A14Q8TDB8 520 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 WDR24Q96S15 920 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 ZSWIM1Q9BR11 485 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 MED10Q9BTT4 135 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 THAP2Q9H0W7 228 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 AVENQ9NQS1 362 aaPredicted RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 MACROD2A1Z1Q3 448 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 TLL1O43897 1013 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 CALCAP01258 141 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 IGFBP6P24592 240 aaPredicted RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 TKTP29401 623 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 ACADSBP45954 432 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 EPHB4P54760 987 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 GNG11P61952 73 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 PSMC1P62191 440 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 MDH1BQ5I0G3 518 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 FAM171BQ6P995 826 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 ZDHHC17Q8IUH5 632 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 SYCE1Q8N0S2 351 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 ZNF653Q96CK0 615 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 C18orf8Q96DM3 657 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 PACSIN1Q9BY11 444 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 GPR62Q9BZJ7 368 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 CXXC1Q9P0U4 656 aaPredicted RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 DNAI1Q9UI46 699 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 TFR2Q9UP52 801 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 SSX2IPQ9Y2D8 614 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 NME7Q9Y5B8 376 aa14.48□□□□□ -0.09
VAPB-202ENST00000395802 MRPL42Q9Y6G3 142 aaKnown RBP14.48□□□□□ -0.09
VAPB-202ENST00000395802 NT5C1B-RDH14C9J2C7 533 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 F8W810 466 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 SOD2P04179 222 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 FAM200BP0CF97 657 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 TAP1Q03518 808 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 MRPL58Q14197 206 aaKnown RBP14.47□□□□□ -0.09
VAPB-202ENST00000395802 CTXN3Q4LDR2 81 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 DENND1BQ6P3S1 775 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 MON1BQ7L1V2 547 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 SLC39A11Q8N1S5 342 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 COLGALT1Q8NBJ5 622 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 FUBP3Q96I24 572 aaKnown RBP eCLIP14.47□□□□□ -0.09
VAPB-202ENST00000395802 HSFY1Q96LI6 401 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 DUSP16Q9BY84 665 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 CTTNBP2NLQ9P2B4 639 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 TRIM10Q9UDY6 481 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 CNOT8Q9UFF9 292 aaKnown RBP14.47□□□□□ -0.09
VAPB-202ENST00000395802 NCANO14594 1321 aa14.47□□□□□ -0.09
VAPB-202ENST00000395802 CYP1A2P05177 515 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 NPR3P17342 541 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 ADORA2BP29275 332 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 TERF1P54274 439 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 HADHBP55084 474 aaKnown RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 CREMQ03060 361 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 PDCLQ13371 301 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 RASIP1Q5U651 963 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 TMCO2Q7Z6W1 182 aaPredicted RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 DDX53Q86TM3 631 aaKnown RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 GPR65Q8IYL9 337 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 UBA3Q8TBC4 463 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 SLC35G2Q8TBE7 412 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 C2orf15Q8WU43 125 aaKnown RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 CLP1Q92989 425 aaKnown RBP14.46□□□□□ -0.09
VAPB-202ENST00000395802 PCED1BQ96HM7 432 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 C11orf70Q9BRQ4 267 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 UBXN6Q9BZV1 441 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 CRTAC1Q9NQ79 661 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 ST7Q9NRC1 585 aa14.46□□□□□ -0.09
VAPB-202ENST00000395802 MYBPHLA2RUH7 354 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 XPO1O14980 1071 aaKnown RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 CFHP08603 1231 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 CCDC130P13994 396 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 PBX3P40426 434 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 PLA2G4AP47712 749 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 GSCP56915 257 aaPredicted RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 ZNF268Q14587 947 aaPredicted RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 ZNF569Q5MCW4 686 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 MMS22LQ6ZRQ5 1243 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 SPATA2LQ8IUW3 424 aaPredicted RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 WDTC1Q8N5D0 677 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 SLC35F5Q8WV83 523 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms