RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 CPSF3Q9UKF6 684 aaKnown RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 ZNF233A6NK53 670 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 LACTBL1A8MY62 500 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 PTGESO14684 152 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 RAD51CO43502 376 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 IRX1P78414 480 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 BTG3Q14201 252 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 PSMD6Q15008 389 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 CLUL1Q15846 466 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 LMBRD2Q68DH5 695 aaPredicted RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 GLB1LQ6UWU2 654 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 KLHL7Q8IXQ5 586 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 FBXL13Q8NEE6 735 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 TAS1R2Q8TE23 839 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 SLC20A1Q8WUM9 679 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 ZNF516Q92618 1163 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 ZMAT2Q96NC0 199 aaKnown RBP15.13■□□□□ 0.01
HMGA1-203ENST00000374116 RAD9AQ99638 391 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 NKX2-4Q9H2Z4 354 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 RAB20Q9NX57 234 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 TAS2R14Q9NYV8 317 aa15.13■□□□□ 0.01
HMGA1-203ENST00000374116 TDRD15B5MCY1 1934 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 H0YHG0 523 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 NDUFAB1O14561 156 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 RTN2O75298 545 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 FTLP02792 175 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 GZMAP12544 262 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 CARSP49589 748 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 YARSP54577 528 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 HTRA4P83105 476 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 NOMO2Q5JPE7 1267 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 KDM7AQ6ZMT4 941 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 TAX1BP1Q86VP1 789 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 PALB2Q86YC2 1186 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 MREGQ8N565 214 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 C3orf20Q8ND61 904 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 CASKIN2Q8WXE0 1202 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 IFT81Q8WYA0 676 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 ARHGEF26Q96DR7 871 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 SLITRK6Q9H5Y7 841 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 ACTR5Q9H9F9 607 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 TBC1D13Q9NVG8 400 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 NFU1Q9UMS0 254 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 INSL6Q9Y581 213 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 MRPL42Q9Y6G3 142 aaKnown RBP15.12■□□□□ 0.01
HMGA1-203ENST00000374116 ANK1P16157 1881 aa15.12■□□□□ 0.01
HMGA1-203ENST00000374116 NT5C1B-RDH14C9J2C7 533 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 MYO1FO00160 1098 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 KRIT1O00522 736 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 DDX3YO15523 660 aaKnown RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 HSF2BPO75031 334 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 DDHD2O94830 711 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 CLTAP09496 248 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 GUCY2FP51841 1108 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 GPC5P78333 572 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 RNASELQ05823 741 aaKnown RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 CUL1Q13616 776 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 SPOUT1Q5T280 376 aaKnown RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 C11orf63Q6NUN7 778 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 APBB1IPQ7Z5R6 666 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 PPM1KQ8N3J5 372 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 C18orf25Q96B23 403 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 SNX27Q96L92 541 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 FAM81BQ96LP2 452 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 RPS6KC1Q96S38 1066 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 CARD9Q9H257 536 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 KLC4Q9NSK0 619 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 RBAKQ9NYW8 714 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 NOCTQ9UK39 431 aaKnown RBP15.11■□□□□ 0.01
HMGA1-203ENST00000374116 GIT1Q9Y2X7 761 aa15.11■□□□□ 0.01
HMGA1-203ENST00000374116 SMIM28A0A1B0GU29 152 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 F8W810 466 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 ZC3H11AO75152 810 aaKnown RBP eCLIP15.1■□□□□ 0.012e-11■□□□□ 8.9
HMGA1-203ENST00000374116 CSPG5O95196 566 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 C4BPAP04003 597 aaKnown RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 CHRNB2P17787 502 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 DNAJB2P25686 324 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 PTPROQ16827 1216 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 PAAF1Q9BRP4 392 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 COG5Q9UP83 839 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 MYO9BQ13459 2157 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 CASTOR2A6NHX0 329 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 MIF4GDA9UHW6 222 aaKnown RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 BHMG1C9JSJ3 638 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 SART1O43290 800 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms