RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 PKNOX2Q96KN3 472 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 TRIM6Q9C030 488 aaPredicted RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 DPP3Q9NY33 737 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 GINS2Q9Y248 185 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 RNF40O75150 1001 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 NPTXRO95502 500 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 FGBP02675 491 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 SSR1P43307 286 aaKnown RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 GUCY2FP51841 1108 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 GPR153Q6NV75 609 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 PSRC1Q6PGN9 363 aaPredicted RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 CCDC137Q6PK04 289 aaKnown RBP11.51□□□□□ -0.57
H3F3A-202ENST00000366814 PHLDB2Q86SQ0 1253 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 SESTD1Q86VW0 696 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 CCDC50Q8IVM0 306 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 CCDC105Q8IYK2 499 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 SEC14L1Q92503 715 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 EXOC4Q96A65 974 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 ERP44Q9BS26 406 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 LHX5Q9H2C1 402 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 HOMER3Q9NSC5 361 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 GTF2IRD1Q9UHL9 959 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 POLIQ9UNA4 740 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 AGAP1Q9UPQ3 857 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
H3F3A-202ENST00000366814 RALGAPA2Q2PPJ7 1873 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 SCN5AQ14524 2016 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 MBLAC1A4D2B0 266 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 HAS3O00219 553 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 DAPK3O43293 454 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 CFHP08603 1231 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 CYP1B1Q16678 543 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 C2CD6Q53TS8 623 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 ZNF771Q7L3S4 317 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 JAMLQ86YT9 394 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 C3orf20Q8ND61 904 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 GRK7Q8WTQ7 553 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 CELF4Q9BZC1 486 aaKnown RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 MIS12Q9H081 205 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 ADAMTS10Q9H324 1103 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 SYNCQ9H7C4 482 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 ERVK-5Q9HDB9 667 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
H3F3A-202ENST00000366814 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
H3F3A-202ENST00000366814 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FSCN2O14926 492 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 SYF2O95926 243 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 ATF7P17544 494 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 COILP38432 576 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 RAP1GAPP47736 663 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DRG2P55039 364 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TMEM62Q0P6H9 643 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 SGO2Q562F6 1265 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 AADACL2Q6P093 401 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DEFB128Q7Z7B8 93 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 KATNAL2Q8IYT4 538 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TMEM176AQ96HP8 235 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FAM129AQ9BZQ8 928 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DPH5Q9H2P9 285 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 ADAM21Q9UKJ8 722 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 KIAA1257Q9ULG3 409 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TMEM191CA6NGB0 347 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 CILPO75339 1184 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 GPR32O75388 356 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 ECEL1O95672 775 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FAM153BP0C7A2 387 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 VDRP11473 427 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 RAD23BP54727 409 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 SMAD3P84022 425 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DMTNQ08495 405 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 STILQ15468 1287 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FAM153CQ494X1 144 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 DUPD1Q68J44 220 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 Q7L0L9 218 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 NME8Q8N427 588 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 EXD1Q8NHP7 514 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms