RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CCDC134Q9H6E4 229 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 ZWILCHQ9H900 591 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.17■□□□□ 0.982e-12■■■■■ 36.9
SPG7-202ENST00000341316 SAMD15Q9P1V8 674 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 SAE1Q9UBE0 346 aaPredicted RBP21.17■□□□□ 0.98
SPG7-202ENST00000341316 STRIP2Q9ULQ0 834 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 MCF2P10911 925 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 ADORA2AP29274 412 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 EPHX2P34913 555 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 PTPN7P35236 360 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 ARSEP51690 589 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 COPS2P61201 443 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 POU5F1BQ06416 359 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 PREPLQ4J6C6 727 aaPredicted RBP21.17■□□□□ 0.98
SPG7-202ENST00000341316 USP50Q70EL3 339 aaPredicted RBP21.17■□□□□ 0.98
SPG7-202ENST00000341316 TAX1BP1Q86VP1 789 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 XYLT1Q86Y38 959 aa21.17■□□□□ 0.98
SPG7-202ENST00000341316 ZCCHC9Q8N567 271 aaKnown RBP21.17■□□□□ 0.98
SPG7-202ENST00000341316 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 MED7O43513 233 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 CILPO75339 1184 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 ADCYAP1R1P41586 468 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 PTPN11Q06124 597 aaPredicted RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 SNAPC2Q13487 334 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 LDLRAD1Q5T700 205 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 ILDR2Q71H61 639 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 IFNLR1Q8IU57 520 aaPredicted RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 RBM15Q96T37 977 aaKnown RBP eCLIP21.16■□□□□ 0.986e-7■■■□□ 18.9
SPG7-202ENST00000341316 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 DDX56Q9NY93 547 aaKnown RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 LOC102724159A0A0B4J2E5 919 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 MICAL2O94851 1124 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 VCPP55072 806 aaKnown RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 LMNB2Q03252 620 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 PWP2Q15269 919 aaKnown RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 VSTM1Q6UX27 236 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 RELL1Q8IUW5 271 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 TMEM176AQ96HP8 235 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 TMEM121Q9BTD3 319 aa21.16■□□□□ 0.98
SPG7-202ENST00000341316 METTL5Q9NRN9 209 aaKnown RBP21.16■□□□□ 0.98
SPG7-202ENST00000341316 DNALI1O14645 258 aaPredicted RBP21.15■□□□□ 0.98
SPG7-202ENST00000341316 GH1P01241 217 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 POLR2BP30876 1174 aaKnown RBP21.15■□□□□ 0.98
SPG7-202ENST00000341316 GPS1Q13098 491 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 MAP1SQ66K74 1059 aaPredicted RBP21.15■□□□□ 0.98
SPG7-202ENST00000341316 TAOK1Q7L7X3 1001 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 GPRC5AQ8NFJ5 357 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 PPTC7Q8NI37 304 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 KATNBL1Q9H079 304 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 C10orf88Q9H8K7 445 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 SLC12A4Q9UP95 1085 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 DRG1Q9Y295 367 aaKnown RBP21.15■□□□□ 0.98
SPG7-202ENST00000341316 TCEA3O75764 348 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 CD48P09326 243 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 MAGEA4P43358 317 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 DYNLT1P63172 113 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 POLNQ7Z5Q5 900 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 CEP57Q86XR8 500 aa21.15■□□□□ 0.98
SPG7-202ENST00000341316 ZC3H15Q8WU90 426 aaKnown RBP21.15■□□□□ 0.98
SPG7-202ENST00000341316 MGRN1O60291 552 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 ELF3P78545 371 aaPredicted RBP21.14■□□□□ 0.97
SPG7-202ENST00000341316 TNFAIP2Q03169 654 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 PDE4CQ08493 712 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 LRRC14Q15048 493 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 HP1BP3Q5SSJ5 553 aaPredicted RBP21.14■□□□□ 0.97
SPG7-202ENST00000341316 CYP4F22Q6NT55 531 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 NKD2Q969F2 451 aaPredicted RBP21.14■□□□□ 0.97
SPG7-202ENST00000341316 CXCL16Q9H2A7 254 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 TBK1Q9UHD2 729 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPG7-202ENST00000341316 AGAP1Q9UPQ3 857 aa21.14■□□□□ 0.97
SPG7-202ENST00000341316 TMEM120BA0PK00 339 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 MAGEB2O15479 319 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 PECAM1P16284 738 aaPredicted RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 IBSPP21815 317 aaPredicted RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 MPP2Q14168 576 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 FASTKD3Q14CZ7 662 aaKnown RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 TAF5Q15542 800 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 WLSQ5T9L3 541 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 MTHFD1LQ6UB35 978 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 SLC35B2Q8TB61 432 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 MGARPQ8TDB4 240 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 HPDLQ96IR7 371 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 NSRP1Q9H0G5 558 aaKnown RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 ASB7Q9H672 318 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 SYNCQ9H7C4 482 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 VRTNQ9H8Y1 702 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 CENPFP49454 3210 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 M0QYV0 167 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 TSPAN1O60635 241 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 SNAI1O95863 264 aaPredicted RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 GSTA1P08263 222 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 CYP3A5P20815 502 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 GPD2P43304 727 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 MARCH8Q5T0T0 291 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 DPH6Q7L8W6 267 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 TRPM8Q7Z2W7 1104 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 UBA3Q8TBC4 463 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 FNIP1Q8TF40 1166 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 NLRP7Q8WX94 980 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms