RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 RFWD2Q8NHY2 731 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 FGFBP2Q9BYJ0 223 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 DDX18Q9NVP1 670 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NAALADL1Q9UQQ1 740 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CEPT1Q9Y6K0 416 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PLXND1Q9Y4D7 1925 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 LAMA1P25391 3075 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ZBTB42B2RXF5 422 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 VWA5AO00534 786 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 P4HA2O15460 535 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MAGEC1O60732 1142 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TTLL1O95922 423 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 UQCRBP14927 111 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ACADVLP49748 655 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 RASSF2P50749 326 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 LRRC63Q05C16 580 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ITGA7Q13683 1181 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 THOC5Q13769 683 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MYBPC2Q14324 1141 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 EFTUD2Q15029 972 aaKnown RBP eCLIP5.88□□□□□ -1.471e-9■□□□□ 8.8
CSDE1-202ENST00000339438 TMCO4Q5TGY1 634 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NLRP9Q7RTR0 991 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 GUF1Q8N442 669 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 LNX1Q8TBB1 728 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PLEKHO2Q8TD55 490 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TRIB2Q92519 343 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ABTB1Q969K4 478 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 HAUS1Q96CS2 278 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MPHOSPH6Q99547 160 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 POP1Q99575 1024 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CGREF1Q99674 301 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CNNM2Q9H8M5 875 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MAGEF1Q9HAY2 307 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CCPG1Q9ULG6 757 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NEU2Q9Y3R4 380 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PCDHA2Q9Y5H9 948 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TNKSO95271 1327 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 HAS3O00219 553 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PGM3O95394 542 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TTC4O95801 387 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TSPY3P0CV98 308 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TSPY8P0CW00 308 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PPP1R2P41236 205 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 GSTO1P78417 241 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 KLHL30Q0D2K2 578 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MAP7Q14244 749 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PPP2R5BQ15173 497 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NONOQ15233 471 aaKnown RBP eCLIP5.88□□□□□ -1.472e-6■■□□□ 12.7
CSDE1-202ENST00000339438 IFIT1BQ5T764 474 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PAOXQ6QHF9 649 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TMTC3Q6ZXV5 915 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TRIM50Q86XT4 487 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 RIOX2Q8IUF8 465 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ST13P4Q8IZP2 240 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF280CQ8ND82 737 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 OR6Y1Q8NGX8 325 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF398Q8TD17 642 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 FAM172AQ8WUF8 416 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 SLCO2A1Q92959 643 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TANGO6Q9C0B7 1094 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PORCNQ9H237 461 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NDUFA13Q9P0J0 144 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ITGB1BP2Q9UKP3 347 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ADAMTS6Q9UKP5 1117 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 FADS3Q9Y5Q0 445 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MYMKA6NI61 221 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 SOBPA7XYQ1 873 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 TMEM110-MUSTN1A8MSY1 372 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 NDUFB5O43674 189 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 VCLP18206 1134 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 STX2P32856 288 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 AQP4P55087 323 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 STRN3Q13033 797 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 SNAPC2Q13487 334 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 CYLC2Q14093 348 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 KRT72Q14CN4 511 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 SLC1A5Q15758 541 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ZYXQ15942 572 aaKnown RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 MAPK6Q16659 721 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ANKDD1AQ495B1 522 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 THOC7Q6I9Y2 204 aaKnown RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ALKBH5Q6P6C2 394 aaKnown RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 C1orf228Q6PIY5 440 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ARHGEF18Q6ZSZ5 1173 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 CYFIP1Q7L576 1253 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF410Q86VK4 478 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 MYOCDQ8IZQ8 938 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 C12orf50Q8NA57 414 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ANKK1Q8NFD2 765 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
CSDE1-202ENST00000339438 GBA3Q9H227 469 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ZFP69BQ9UJL9 534 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF148Q9UQR1 794 aa5.87□□□□□ -1.47
CSDE1-202ENST00000339438 A0A088AWK7 358 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms