RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MZT2AQ6P582 158 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 UBE2Q1Q7Z7E8 422 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ANKMY2Q8IV38 441 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC17Q96LX7 622 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 TEX13BQ9BXU2 312 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 RGS18Q9NS28 235 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PAK5Q9P286 719 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 ATP10AO60312 1499 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 MAP3K19Q56UN5 1328 aa6.41□□□□□ -1.38
CSMD1-201ENST00000335551 AXIN1O15169 862 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 MTSS1O43312 755 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ANXA6P08133 673 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 COASYQ13057 564 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PPP1R18Q6NYC8 613 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SPICE1Q8N0Z3 855 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 EID3Q8N140 333 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 HAVCR1Q96D42 359 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF496Q96IT1 587 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 K7ERI5 159 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ABLIM1O14639 778 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DYNC1LI2O43237 492 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 VIL1P09327 827 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 GHRP10912 638 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PDHBP11177 359 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ATP6V1B2P21281 511 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 HK2P52789 917 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 BICRALQ6AI39 1079 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DGKHQ86XP1 1220 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SYTL1Q8IYJ3 562 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DCUN1D5Q9BTE7 237 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PAGR1Q9BTK6 254 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 JMJD4Q9H9V9 463 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 LRFN2Q9ULH4 789 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 FAM20BO75063 409 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 TKTP29401 623 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 LRPAP1P30533 357 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 GUCA1AP43080 201 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PWP1Q13610 501 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 KNOP1Q1ED39 458 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 KIZQ2M2Z5 673 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 OR6B3Q8NGW1 331 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 THUMPD3Q9BV44 507 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 EPB41L4AQ9HCS5 686 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 NUP153P49790 1475 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 A0A1B0GTH6 734 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 FAM220BPB1ANY3 271 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SORBS3O60504 671 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 QPRTQ15274 297 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 C3orf62Q6ZUJ4 267 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF554Q86TJ5 538 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 JAMLQ86YT9 394 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 AMER2Q8N7J2 671 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PIK3C3Q8NEB9 887 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ZIM3Q96PE6 472 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 RRN3Q9NYV6 651 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ASAP1Q9ULH1 1129 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PDS5AQ29RF7 1337 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SERPINB5P36952 375 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 CHN2P52757 468 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DLGAP5Q15398 846 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 FAM83EQ2M2I3 478 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 COBLL1Q53SF7 1204 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SCARA3Q6AZY7 606 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 G2E3Q7L622 706 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 FASTKD5Q7L8L6 764 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 OR7A2PQ8NGA2 310 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SYTL5Q8TDW5 730 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 RASSF5Q8WWW0 418 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DLG3Q92796 817 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PVALEFA0A1B0GWK0 134 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 TTC26A0AVF1 554 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 MAGEA2P43356 314 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 BAG6P46379 1132 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 CSNK2BP67870 215 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 BTN3A2P78410 334 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 LAYNQ6UX15 382 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 ARID3BQ8IVW6 561 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 CAMKK2Q96RR4 588 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 DHX35Q9H5Z1 703 aaKnown RBP6.4□□□□□ -1.38
CSMD1-201ENST00000335551 PLGRKTQ9HBL7 147 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 C2CD2Q9Y426 696 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 CDC42BPBQ9Y5S2 1711 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 GJA3Q9Y6H8 435 aa6.4□□□□□ -1.38
CSMD1-201ENST00000335551 SSU72P8A0A1W2PR75 194 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 SLC26A4O43511 780 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 ATXN8OSP0DMR3 200 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 ALDH1B1P30837 517 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 CHI3L1P36222 383 aaPredicted RBP6.4□□□□□ -1.39
CSMD1-201ENST00000335551 PRCPP42785 496 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 MAGEA4P43358 317 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 PHKA2P46019 1235 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 DLG4P78352 724 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 ABATP80404 500 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 CDK17Q00537 523 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 RASSF6Q6ZTQ3 369 aa6.4□□□□□ -1.39
CSMD1-201ENST00000335551 LARGE2Q8N3Y3 721 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms