RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 TUT1Q9H6E5 874 aaKnown RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 NOCTQ9UK39 431 aaKnown RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 CYP1A2P05177 515 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 QPCTQ16769 361 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 WDR49Q8IV35 697 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 MFSD14AQ96MC6 490 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 KLHL8Q9P2G9 620 aaPredicted RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 FIS1Q9Y3D6 152 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 LRP5O75197 1615 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 FAM47DPA6NHR8 397 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 LPXNO60711 386 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 NDST1P52848 882 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 NOMO3P69849 1222 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 RAPH1Q70E73 1250 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 KIAA0319LQ8IZA0 1049 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SCYL1Q96KG9 808 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 LRRC37BQ96QE4 947 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 PSTPIP1O43586 416 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 LYPLA2O95372 231 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SLC4A1P02730 911 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 CREB1P16220 341 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SATB1Q01826 763 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 LVRNQ6Q4G3 990 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
HERC6-201ENST00000264346 ADARB2Q9NS39 739 aaKnown RBP13.16□□□□□ -0.3
HERC6-201ENST00000264346 SKOR1P84550 965 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 CENPCQ03188 943 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 CCNG2Q16589 344 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 ERP27Q96DN0 273 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
HERC6-201ENST00000264346 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 CCT8L1PA6NM43 557 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
HERC6-201ENST00000264346 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
HERC6-201ENST00000264346 NXNQ6DKJ4 435 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 FAM131BQ86XD5 332 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 RASGEF1CQ8N431 466 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 HIPK4Q8NE63 616 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 CFAP61Q8NHU2 1237 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 VPS11Q9H270 941 aa13.15□□□□□ -0.3
HERC6-201ENST00000264346 PPARGC1AQ9UBK2 798 aaKnown RBP13.15□□□□□ -0.3
HERC6-201ENST00000264346 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.3
HERC6-201ENST00000264346 PRRC2BQ5JSZ5 2229 aaKnown RBP13.15□□□□□ -0.31
HERC6-201ENST00000264346 MOCS2O96007 188 aaPredicted RBP13.15□□□□□ -0.31
HERC6-201ENST00000264346 GPD1P21695 349 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 OAZ1P54368 228 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 MMRN1Q13201 1228 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 NPNTQ6UXI9 565 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 BORCS6Q96GS4 357 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 NACA2Q9H009 215 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 WHRNQ9P202 907 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 ARHGAP28Q9P2N2 729 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 USP18Q9UMW8 372 aa13.15□□□□□ -0.31
HERC6-201ENST00000264346 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.31
HERC6-201ENST00000264346 APOL1O14791 398 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 MAPK13O15264 365 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 ATP9BO43861 1147 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 KRT37O76014 449 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 ACAT1P24752 427 aaKnown RBP13.14□□□□□ -0.31
HERC6-201ENST00000264346 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
HERC6-201ENST00000264346 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 SCN4BQ8IWT1 228 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 MREGQ8N565 214 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 JOSD2Q8TAC2 188 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 CDKL2Q92772 493 aa13.14□□□□□ -0.31
HERC6-201ENST00000264346 ZC3H7BQ9UGR2 993 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms