RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 YAF2Q8IY57 180 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 TMEM174Q8WUU8 243 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF516Q92618 1163 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 SMARCE1Q969G3 411 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 E2F7Q96AV8 911 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 TRMT61BQ9BVS5 477 aaKnown RBP15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 IRF2BPLQ9H1B7 796 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 BRD9Q9H8M2 597 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 TBC1D17Q9HA65 648 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 TMLHEQ9NVH6 421 aa15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 MAGEC2Q9UBF1 373 aaPredicted RBP15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 CIZ1Q9ULV3 898 aaPredicted RBP15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 MAGED2Q9UNF1 606 aaPredicted RBP15.95■□□□□ 0.14
PPFIA1-225ENST00000638133 KRBA1A5PL33 1030 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 KINO60870 393 aaKnown RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 CSH1P0DML2 217 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 CSH2P0DML3 217 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 P4HA1P13674 534 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 PSMC3P17980 439 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 CYP2F1P24903 491 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 PSMC2P35998 433 aaKnown RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 PSMC1P62191 440 aaKnown RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 CYP27A1Q02318 531 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 ADAM9Q13443 819 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 NCOA4Q13772 614 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF699Q32M78 642 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF667Q5HYK9 610 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 GPR158Q5T848 1215 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 INTS8Q75QN2 995 aaKnown RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 SCN4BQ8IWT1 228 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 TMEM105Q8N8V8 129 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 FUBP3Q96I24 572 aaKnown RBP eCLIP15.94■□□□□ 0.142e-8■■■■■ 41.6
PPFIA1-225ENST00000638133 ZSWIM3Q96MP5 696 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 TSG101Q99816 390 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 LRRC3Q9BY71 257 aa15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 GTPBP4Q9BZE4 634 aaKnown RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF334Q9HCZ1 680 aaPredicted RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 UXTQ9UBK9 157 aaPredicted RBP15.94■□□□□ 0.14
PPFIA1-225ENST00000638133 MYBPHLA2RUH7 354 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 IKBKBO14920 756 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 MAPK13O15264 365 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 HCRTO43612 131 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 TACC1O75410 805 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 MOSPD3O75425 235 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 STAU1O95793 577 aaKnown RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 FAM163BP0C2L3 166 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 NPR3P17342 541 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 LMO2P25791 158 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 ANXA13P27216 316 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 VAMP7P51809 220 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 PRKCQQ04759 706 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 GRM2Q14416 872 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 MLF2Q15773 248 aaPredicted RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 SGSM1Q2NKQ1 1148 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 CFAP221Q4G0U5 840 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 SLC44A4Q53GD3 710 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 TDRD10Q5VZ19 366 aaKnown RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 CWF19L1Q69YN2 538 aaKnown RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 FAM186BQ8IYM0 893 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 SMYD4Q8IYR2 804 aaPredicted RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 CCDC150Q8NCX0 1101 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 PRSS33Q8NF86 280 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 TMC2Q8TDI7 906 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 KBTBD7Q8WVZ9 684 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 IRF7Q92985 503 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 TIGD1Q96MW7 591 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 GSDMAQ96QA5 445 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 MRPL45Q9BRJ2 306 aaKnown RBP15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 PLA2G2FQ9BZM2 168 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 IMPG2Q9BZV3 1241 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 ZMYM5Q9UJ78 669 aa15.93■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF318Q5VUA4 2279 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 A8MXQ7 604 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF263O14978 683 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 GALR2O43603 387 aaPredicted RBP15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 ATP2C2O75185 946 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 C4BPAP04003 597 aaKnown RBP15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 FCARP24071 287 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 GDI1P31150 447 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 GRIK1P39086 918 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 ANP32AP39687 249 aaKnown RBP15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 VIPR2P41587 438 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 PIK3CAP42336 1068 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 DLG4P78352 724 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 CLDN10P78369 228 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 STIM1Q13586 685 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 NFIL3Q16649 462 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 DDR2Q16832 855 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 STXBP5Q5T5C0 1151 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 ZNF658Q5TYW1 1059 aaPredicted RBP15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 PHLDB3Q6NSJ2 640 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 GAREM2Q75VX8 874 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 LIMS2Q7Z4I7 341 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 ENGASEQ8NFI3 743 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 PLEKHO2Q8TD55 490 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 DNASE1L2Q92874 299 aa15.92■□□□□ 0.14
PPFIA1-225ENST00000638133 MYLPFQ96A32 169 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms