RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZNF516Q92618 1163 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 ZNF334Q9HCZ1 680 aaPredicted RBP14.79□□□□□ -0.04
PNKP-228ENST00000637325 DMAC2Q9NW81 257 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 GTF3C4Q9UKN8 822 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 MAPK8IP1Q9UQF2 711 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 KIF26AQ9ULI4 1882 aaPredicted RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 GABRDO14764 452 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 PI15O43692 258 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 CDC25CP30307 473 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 ATICP31939 592 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 GNL1P36915 607 aaPredicted RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 VIPR2P41587 438 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 PRKCQQ04759 706 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 TCF15Q12870 199 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 GRM2Q14416 872 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 MLF2Q15773 248 aaPredicted RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 PHLDB3Q6NSJ2 640 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 YAF2Q8IY57 180 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 OR6B3Q8NGW1 331 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 PARD3BQ8TEW8 1205 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 E2F7Q96AV8 911 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 TRMT61BQ9BVS5 477 aaKnown RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 BRD9Q9H8M2 597 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 ABCB6Q9NP58 842 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 NXF1Q9UBU9 619 aaKnown RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 MAGED2Q9UNF1 606 aaPredicted RBP14.78□□□□□ -0.04
PNKP-228ENST00000637325 PIEZO1Q92508 2521 aa14.78□□□□□ -0.04
PNKP-228ENST00000637325 MYBPHLA2RUH7 354 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 LRRIQ3A6PVS8 624 aaPredicted RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 DPYSL4O14531 572 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 HCRTO43612 131 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 CSH1P0DML2 217 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 CSH2P0DML3 217 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 PSMC3P17980 439 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 FCARP24071 287 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 CYP2F1P24903 491 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 GPR15P49685 360 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 MYL6P60660 151 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 PSMC1P62191 440 aaKnown RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 PNOCQ13519 176 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 MAPRE1Q15691 268 aaKnown RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 DDR2Q16832 855 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 GAREM2Q75VX8 874 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 GPIHBP1Q8IV16 184 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 SCN4BQ8IWT1 228 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 FMR1NBQ8N0W7 255 aaPredicted RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 GUF1Q8N442 669 aaKnown RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 PLEKHO2Q8TD55 490 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 TMEM174Q8WUU8 243 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 DEPDC1BQ8WUY9 529 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 KBTBD7Q8WVZ9 684 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 ATOH1Q92858 354 aaPredicted RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 RMND1Q9NWS8 449 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 HOOK1Q9UJC3 728 aaKnown RBP14.77□□□□□ -0.05
PNKP-228ENST00000637325 TRAF3IP3Q9Y228 551 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 SIT1Q9Y3P8 196 aa14.77□□□□□ -0.05
PNKP-228ENST00000637325 HEPACAM2A8MVW5 462 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 H0Y858 1186 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 ZNF263O14978 683 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 ATP2C2O75185 946 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 SMC2O95347 1197 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 STAU1O95793 577 aaKnown RBP14.76□□□□□ -0.05
PNKP-228ENST00000637325 FAM163BP0C2L3 166 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 NR2F2P24468 414 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 LMO2P25791 158 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 GDI1P31150 447 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 STARD6P59095 220 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 CYP4F8P98187 520 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 CYP27A1Q02318 531 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 FAM160A1Q05DH4 1040 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 NCOA4Q13772 614 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 ZNF699Q32M78 642 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 ZNF667Q5HYK9 610 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 STXBP5Q5T5C0 1151 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 SDHAF4Q5VUM1 108 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
PNKP-228ENST00000637325 FAM171BQ6P995 826 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 VITQ6UXI7 678 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 LIMS2Q7Z4I7 341 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 ARID3BQ8IVW6 561 aaPredicted RBP14.76□□□□□ -0.05
PNKP-228ENST00000637325 MFSD6LQ8IWD5 586 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 DTWD2Q8NBA8 298 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 TMC2Q8TDI7 906 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 IRF7Q92985 503 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 FUBP3Q96I24 572 aaKnown RBP eCLIP14.76□□□□□ -0.05
PNKP-228ENST00000637325 PKMYT1Q99640 499 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 MRPL45Q9BRJ2 306 aaKnown RBP14.76□□□□□ -0.05
PNKP-228ENST00000637325 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms