RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 CCDC83Q8IWF9 413 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 SYT8Q8NBV8 401 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 C1orf162Q8NEQ5 155 aaPredicted RBP1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 FUBP3Q96I24 572 aaKnown RBP eCLIP1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 DMRTA2Q96SC8 542 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 CEP89Q96ST8 783 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 LSM14BQ9BX40 385 aaKnown RBP1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 KANSL2Q9H9L4 492 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 MAGEF1Q9HAY2 307 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 XPNPEP3Q9NQH7 507 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 CNNM1Q9NRU3 951 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 FOXJ2Q9P0K8 574 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 LIMCH1Q9UPQ0 1083 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 NRKQ7Z2Y5 1582 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 DUOX1Q9NRD9 1551 aa1.77□□□□□ -2.13
AP000648.3-201ENST00000623539 UBR1Q8IWV7 1749 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC69A6NI79 296 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 GRM8O00222 908 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 B3GALT2O43825 422 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ALDH1A2O94788 518 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 GCP02774 474 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC172P0C7W6 258 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 XRCC6P12956 609 aaKnown RBP eCLIP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 NKX6-1P78426 367 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PPP3CAQ08209 521 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HSP90AB2PQ58FF8 381 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PITRM1Q5JRX3 1037 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CLEC4GQ6UXB4 293 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF804AQ7Z570 1209 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ANKRD18AQ8IVF6 992 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ZFPM1Q8IX07 1006 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 SLC17A8Q8NDX2 589 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HAS1Q92839 578 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 TNPO1Q92973 898 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 RILPL2Q969X0 211 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PGBD1Q96JS3 809 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 VPS11Q9H270 941 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 SLC2A4RGQ9NR83 387 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PFDN2Q9UHV9 154 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HDAC9Q9UKV0 1011 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 WDR17Q8IZU2 1322 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CDHR2Q9BYE9 1310 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ADAMTS13Q76LX8 1427 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 A0A1B0GTL3 188 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PRAMEF25A6NGN4 478 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 KCNAB3O43448 404 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 MARCH6O60337 910 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HLA-DOAP06340 250 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HOXC6P09630 235 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF853P0CG23 659 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CYP2C9P11712 490 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 NPEPPSP55786 919 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 MTX1Q13505 466 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 RNF187Q5TA31 235 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 VPS53Q5VIR6 699 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CREBRFQ8IUR6 639 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CEP57L1Q8IYX8 460 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 KCNG4Q8TDN1 519 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 NOC3LQ8WTT2 800 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 SCAMP4Q969E2 229 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 LOXL4Q96JB6 756 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 UBAC1Q9BSL1 405 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 THAP7Q9BT49 309 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CRNKL1Q9BZJ0 848 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ZBTB40Q9NUA8 1239 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PPP1R1BQ9UD71 204 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 STAP2Q9UGK3 403 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PACSIN3Q9UKS6 424 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 GABRQQ9UN88 632 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 DDX49Q9Y6V7 483 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CD163L1Q9NR16 1453 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 OR2W5A6NFC9 320 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 MYL1P05976 194 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 HMOX1P09601 288 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 TRIM27P14373 513 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 AGFG1P52594 562 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CLRN1P58418 232 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 FAM193AP78312 1265 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 DSC2Q02487 901 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 TPD52L1Q16890 204 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 TMEM266Q2M3C6 531 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ZNF772Q68DY9 489 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 GIMAP6Q6P9H5 292 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 C1QL2Q7Z5L3 287 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 DTX2Q86UW9 622 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CMTR2Q8IYT2 770 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CLRN3Q8NCR9 226 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CCDC112Q8NEF3 446 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 NCOA7Q8NI08 942 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 PIGOQ8TEQ8 1089 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 USP7Q93009 1102 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 FERMT2Q96AC1 680 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 LTV1Q96GA3 475 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 RBM17Q96I25 401 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CHAMP1Q96JM3 812 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 CTAGE1Q96RT6 745 aa1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 UTP14AQ9BVJ6 771 aaKnown RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 ALDH8A1Q9H2A2 487 aaPredicted RBP1.76□□□□□ -2.13
AP000648.3-201ENST00000623539 TMEM8AQ9HCN3 771 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms