RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 DLGAP2Q9P1A6 1054 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 A0A1B0GVG6 124 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM191CA6NGB0 347 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ACKR2O00590 384 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CLDN3O15551 220 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM191BP0C7N4 346 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KRT5P13647 590 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ATP2A2P16615 1042 aaKnown RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GNA15P30679 374 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 YWHAEP62258 255 aaKnown RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TAZQ16635 292 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RCOR2Q8IZ40 523 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RBBP8NLQ8NC74 664 aaPredicted RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FEZF2Q8TBJ5 459 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DDX50Q9BQ39 737 aaKnown RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 STMN4Q9H169 189 aaPredicted RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NKX1-2Q9UD57 310 aaPredicted RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SSTR3P32745 418 aaPredicted RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NCALDP61601 193 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LMNB2Q03252 620 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LAMTOR4Q0VGL1 99 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ERMARDQ5T6L9 678 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 POLNQ7Z5Q5 900 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ANKRD13AQ8IZ07 590 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PRPF31Q8WWY3 499 aaKnown RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RMDN2Q96LZ7 410 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 BCO2Q9BYV7 579 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DCTN4Q9UJW0 460 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MAP3K13O43283 966 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RIPK2O43353 540 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CALCAP01258 141 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DRP2Q13474 957 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TFDP1Q14186 410 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PLCB4Q15147 1175 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DUOXA2Q1HG44 320 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MUM1Q2TAK8 710 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MPZL3Q6UWV2 235 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FASTKD5Q7L8L6 764 aaKnown RBP11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZBTB8OSQ8IWT0 167 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZBTB45Q96K62 511 aaPredicted RBP11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 XYLT2Q9H1B5 865 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SMARCAD1Q9H4L7 1026 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SCN4AP35499 1836 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 LRRIQ4A6NIV6 560 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 POC1B-GALNT4F8VUJ3 575 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 HBP1O60381 514 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SUN1O94901 812 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 HOXC6P09630 235 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ACOT2P49753 483 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TUBP50607 506 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KYNUQ16719 465 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 FBF1Q8TES7 1133 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZNF606Q8WXB4 792 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ERP27Q96DN0 273 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SNF8Q96H20 258 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NIF3L1Q9GZT8 377 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PCDHB4Q9Y5E5 795 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DPPA5A6NC42 116 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MGAMO43451 1857 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ENTPD5O75356 428 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CBX6O95503 412 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DAB2IPQ5VWQ8 1189 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 OR5B17Q8NGF7 314 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TTC8Q8TAM2 541 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ATG4AQ8WYN0 398 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SERPINB12Q96P63 405 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TGS1Q96RS0 853 aaKnown RBP11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 HEMGNQ9BXL5 484 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ADAM22Q9P0K1 906 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RBPJLQ9UBG7 517 aa11.44□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 HOXD8P13378 290 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 BRAFP15056 766 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 KLRC2P26717 231 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ATICP31939 592 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 USP4Q13107 963 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 IRF5Q13568 498 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ACAP1Q15027 740 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RBBP5Q15291 538 aaKnown RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 PRAMEF18Q5VWM3 479 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GPAT2Q6NUI2 795 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TLDC1Q6P9B6 456 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 USP50Q70EL3 339 aaPredicted RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NT5DC4Q86YG4 428 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CXorf38Q8TB03 319 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 P3H4Q92791 437 aa11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DCPSQ96C86 337 aaKnown RBP11.43□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RBM41Q96IZ5 413 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms