RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 A0A1W2PQJ5 194 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 FSCN2O14926 492 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ADAM12O43184 909 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ATP2C2O75185 946 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CNPP09543 421 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 OR4Q2P0C623 313 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CPB1P15086 417 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 KLRC2P26717 231 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CCZ1BP86790 482 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CREMQ03060 361 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 FIGNQ5HY92 759 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 UNC93AQ86WB7 457 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 PALB2Q86YC2 1186 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 GPR65Q8IYL9 337 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 RBBP8NLQ8NC74 664 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM176AQ96HP8 235 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 KLHL5Q96PQ7 755 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM209Q96SK2 561 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ACBD6Q9BR61 282 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 DESI2Q9BSY9 194 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 OXCT2Q9BYC2 517 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
TOP3A-216ENST00000583804 GTF3C4Q9UKN8 822 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
TOP3A-216ENST00000583804 MYBPHLA2RUH7 354 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 PER2O15055 1255 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 TEX28O15482 410 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 TBC1D4O60343 1298 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 CD19P15391 556 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
TOP3A-216ENST00000583804 IGFBP4P22692 258 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 STAT1P42224 750 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 NDUFV1P49821 464 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 RAD23BP54727 409 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 JAM2P57087 298 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 WDR59Q6PJI9 974 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM139Q8IV31 216 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 DCP1BQ8IZD4 617 aaKnown RBP11.65□□□□□ -0.54
TOP3A-216ENST00000583804 UBR7Q8N806 425 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 SHC3Q92529 594 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 LPIN3Q9BQK8 851 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 EDEM3Q9BZQ6 932 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 FAM124BQ9H5Z6 455 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-216ENST00000583804 RXFP1Q9HBX9 757 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 DAAM1Q9Y4D1 1078 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 IRAK3Q9Y616 596 aa11.65□□□□□ -0.54
TOP3A-216ENST00000583804 CYP26A1O43174 497 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 ADH1AP07327 375 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SOX5P35711 763 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SLC39A12Q504Y0 691 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 MDH1BQ5I0G3 518 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
TOP3A-216ENST00000583804 TAF3Q5VWG9 929 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SLC8B1Q6J4K2 584 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 RAD9BQ6WBX8 426 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 Q7L0L9 218 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 LRRTM3Q86VH5 581 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 CRYBG2Q8N1P7 616 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 C12orf29Q8N999 325 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SLC4A11Q8NBS3 891 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 B3GALNT2Q8NCR0 500 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SLC20A1Q8WUM9 679 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 TLE6Q9H808 572 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 CRTAC1Q9NQ79 661 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SPTLC3Q9NUV7 552 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 SEPT11Q9NVA2 429 aaKnown RBP11.64□□□□□ -0.55
TOP3A-216ENST00000583804 VWA8A3KMH1 1905 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
TOP3A-216ENST00000583804 EIF4A3P38919 411 aaKnown RBP11.63□□□□□ -0.55
TOP3A-216ENST00000583804 ROR1Q01973 937 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 CYP27A1Q02318 531 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 PTK2Q05397 1052 aa11.63□□□□□ -0.55
TOP3A-216ENST00000583804 KLHL30Q0D2K2 578 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms