RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SIX5Q8N196 739 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 SMARCD2Q92925 531 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 E2F7Q96AV8 911 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 LPIN3Q9BQK8 851 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 SYT15Q9BQS2 421 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
SS18-212ENST00000579061 ZMYM5Q9UJ78 669 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 MAPK8IP1Q9UQF2 711 aa15.89■□□□□ 0.13
SS18-212ENST00000579061 A0A1W2PRU2 124 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 KRBA1A5PL33 1030 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 NRG2O14511 850 aaPredicted RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 CSH1P0DML2 217 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 CSH2P0DML3 217 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 GJA1P17302 382 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 NPR3P17342 541 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 FCARP24071 287 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 GABRR2P28476 465 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 CDC25CP30307 473 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 GNL1P36915 607 aaPredicted RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 MAGEA11P43364 429 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 RPL10AP62906 217 aaKnown RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 GPC5P78333 572 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 ADAM9Q13443 819 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 NCOA4Q13772 614 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 TEAD2Q15562 447 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 TAF12Q16514 161 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 ZACNQ401N2 412 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 FAM78AQ5JUQ0 283 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 CWF19L1Q69YN2 538 aaKnown RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 TANGO2Q6ICL3 276 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 PHLDB3Q6NSJ2 640 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 C4orf50Q6ZRC1 276 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 INTS8Q75QN2 995 aaKnown RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 GAREM2Q75VX8 874 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 SPATA2LQ8IUW3 424 aaPredicted RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 ST13P5Q8NFI4 369 aaPredicted RBP15.88■□□□□ 0.13
SS18-212ENST00000579061 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 ZSWIM3Q96MP5 696 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 PI4K2AQ9BTU6 479 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 MKNK1Q9BUB5 465 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 ARHGEF3Q9NR81 526 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 OBSL1O75147 1896 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 GREB1Q4ZG55 1949 aa15.88■□□□□ 0.13
SS18-212ENST00000579061 ZNF638Q14966 1978 aaKnown RBP15.87■□□□□ 0.13
SS18-212ENST00000579061 WDFY4Q6ZS81 3184 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 MYBPHLA2RUH7 354 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 AKAP3O75969 853 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 AOC1P19801 751 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 LMO2P25791 158 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 WEE1P30291 646 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 PSMC2P35998 433 aaKnown RBP15.87■□□□□ 0.13
SS18-212ENST00000579061 PLA2G5P39877 138 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 VAMP7P51809 220 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 DLG4P78352 724 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SGSM1Q2NKQ1 1148 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 ZNF699Q32M78 642 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 ARHGAP15Q53QZ3 475 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 ZNF667Q5HYK9 610 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SV2AQ7L0J3 742 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 FAM186BQ8IYM0 893 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 ZSCAN18Q8TBC5 510 aaPredicted RBP15.87■□□□□ 0.13
SS18-212ENST00000579061 GIPC2Q8TF65 315 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 DEPDC1BQ8WUY9 529 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 TAF4BQ92750 862 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SHDQ96IW2 340 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 CEP295NLQ96MC4 621 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 GCNAQ96QF7 691 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 MRPL45Q9BRJ2 306 aaKnown RBP15.87■□□□□ 0.13
SS18-212ENST00000579061 PLA2G2FQ9BZM2 168 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SNX25Q9H3E2 840 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 ATXN3LQ9H3M9 355 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SLITRK6Q9H5Y7 841 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 IL21Q9HBE4 155 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 CRTAC1Q9NQ79 661 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
SS18-212ENST00000579061 SOBPA7XYQ1 873 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 HCRTO43612 131 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 KINO60870 393 aaKnown RBP15.86■□□□□ 0.13
SS18-212ENST00000579061 VNN1O95497 513 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 KRT13P13646 458 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 HMGA1P17096 107 aaKnown RBP15.86■□□□□ 0.13
SS18-212ENST00000579061 CYP2F1P24903 491 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 PRCPP42785 496 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 STARD6P59095 220 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 PRKCQQ04759 706 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 C1orf220Q5T0J3 134 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 IER5LQ5T953 404 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 VSTM1Q6UX27 236 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 SMYD4Q8IYR2 804 aaPredicted RBP15.86■□□□□ 0.13
SS18-212ENST00000579061 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 FLCNQ8NFG4 579 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 OR6B3Q8NGW1 331 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 MYCBPAPQ8TBZ2 947 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 DNASE1L2Q92874 299 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 FAM122AQ96E09 287 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 TRPV5Q9NQA5 729 aa15.86■□□□□ 0.13
SS18-212ENST00000579061 MAGEC2Q9UBF1 373 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms