RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	KCTD10	Q9H3F6	313 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	BRD9	Q9H8M2	597 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	TBC1D17	Q9HA65	648 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	GTF3C4	Q9UKN8	822 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	CDH9	Q9ULB4	789 aa		12.8	□□□□□ -0.36
ABR-222	ENST00000573667	CSH1	P0DML2	217 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	CSH2	P0DML3	217 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	PSMC3	P17980	439 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	RPL13	P26373	211 aa	Known RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	ATIC	P31939	592 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	CASP4	P49662	377 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	SNW1	Q13573	536 aa	Known RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	GRM2	Q14416	872 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	MLF2	Q15773	248 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	SLC44A4	Q53GD3	710 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	GPR158	Q5T848	1215 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	OSTM1	Q86WC4	334 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	YAF2	Q8IY57	180 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	OR6B3	Q8NGW1	331 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	PARD3B	Q8TEW8	1205 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	TMEM174	Q8WUU8	243 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	ZSWIM3	Q96MP5	696 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	SYT15	Q9BQS2	421 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	PLA2G2F	Q9BZM2	168 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	ABCB6	Q9NP58	842 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	TMLHE	Q9NVH6	421 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	DMAC2	Q9NW81	257 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	RMND1	Q9NWS8	449 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	HOOK1	Q9UJC3	728 aa	Known RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-222	ENST00000573667	MAPK8IP1	Q9UQF2	711 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	TRAF3IP3	Q9Y228	551 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	SIT1	Q9Y3P8	196 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	ZDBF2	Q9HCK1	2354 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	WDFY4	Q6ZS81	3184 aa		12.79	□□□□□ -0.36
ABR-222	ENST00000573667	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	DPYSL4	O14531	572 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	PI15	O43692	258 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	STAU1	O95793	577 aa	Known RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	WARS	P23381	471 aa	Known RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	FCAR	P24071	287 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	NR2F2	P24468	414 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	CYP2F1	P24903	491 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	GDI1	P31150	447 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	STARD6	P59095	220 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	MYL6	P60660	151 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	CYP27A1	Q02318	531 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	TCF15	Q12870	199 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	CFAP221	Q4G0U5	840 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	POTEH	Q6S545	545 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	VIT	Q6UXI7	678 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	GAREM2	Q75VX8	874 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	GUF1	Q8N442	669 aa	Known RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	KBTBD7	Q8WVZ9	684 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	ZNF516	Q92618	1163 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	ATOH1	Q92858	354 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	DNASE1L2	Q92874	299 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	IRF7	Q92985	503 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	TRPV4	Q9HBA0	871 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	UXT	Q9UBK9	157 aa	Predicted RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	NXF1	Q9UBU9	619 aa	Known RBP	12.78	□□□□□ -0.36
ABR-222	ENST00000573667	ZMYM5	Q9UJ78	669 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	MYO16	Q9Y6X6	1858 aa		12.78	□□□□□ -0.36
ABR-222	ENST00000573667	COL4A3	Q01955	1670 aa		12.77	□□□□□ -0.36
ABR-222	ENST00000573667	MUC6	Q6W4X9	2439 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	KANSL1L	A0AUZ9	987 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	MYBPHL	A2RUH7	354 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	HEPACAM2	A8MVW5	462 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667		H0Y858	1186 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	NRG2	O14511	850 aa	Predicted RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	ZNF263	O14978	683 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	HCRT	O43612	131 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	TACC1	O75410	805 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	PDGFRB	P09619	1106 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	FAM163B	P0C2L3	166 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	KRT13	P13646	458 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	ANXA13	P27216	316 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	GNL1	P36915	607 aa	Predicted RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	VIPR2	P41587	438 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	PSMC1	P62191	440 aa	Known RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	CYP4F8	P98187	520 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	FAM160A1	Q05DH4	1040 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	PNOC	Q13519	176 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	UBXN2B	Q14CS0	331 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	DDR2	Q16832	855 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	ZNF699	Q32M78	642 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	ZNF667	Q5HYK9	610 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	STXBP5	Q5T5C0	1151 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	TDRD10	Q5VZ19	366 aa	Known RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	FAM171B	Q6P995	826 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	TPRG1	Q6ZUI0	275 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	MFSD6L	Q8IWD5	586 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	SCN4B	Q8IWT1	228 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	CCDC105	Q8IYK2	499 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.77	□□□□□ -0.37
ABR-222	ENST00000573667	PJA1	Q8NG27	643 aa		12.77	□□□□□ -0.37

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