RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 TNNC2P02585 160 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 LAG3P18627 525 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 TNNI1P19237 187 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 PON1P27169 355 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 DNA2P51530 1060 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 FAM109BQ6ICB4 259 aaPredicted RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 ACTRT1Q8TDG2 376 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 IFT81Q8WYA0 676 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 CALR3Q96L12 384 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 NRDE2Q9H7Z3 1164 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 NAGPAQ9UK23 515 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 TDRD15B5MCY1 1934 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 A0A087WUV0 522 aaPredicted RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 P4HA2O15460 535 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 DDHD2O94830 711 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 SLC9A1P19634 815 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 HSPA9P38646 679 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 SAMD11Q96NU1 681 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 TMEM8AQ9HCN3 771 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 MSRAQ9UJ68 235 aa16.4■□□□□ 0.22
VAC14-211ENST00000568886 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
VAC14-211ENST00000568886 KCNK3O14649 394 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 C4BPAP04003 597 aaKnown RBP16.39■□□□□ 0.21
VAC14-211ENST00000568886 LINC00271P0C7V0 271 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 DLG4P78352 724 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 SOX4Q06945 474 aaPredicted RBP16.39■□□□□ 0.21
VAC14-211ENST00000568886 CUL1Q13616 776 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 ZACNQ401N2 412 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 TTC31Q49AM3 519 aaPredicted RBP16.39■□□□□ 0.21
VAC14-211ENST00000568886 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 OR5B17Q8NGF7 314 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 ZNF516Q92618 1163 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 C18orf25Q96B23 403 aaPredicted RBP16.39■□□□□ 0.21
VAC14-211ENST00000568886 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 DPP3Q9NY33 737 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 TRIP11Q15643 1979 aa16.39■□□□□ 0.21
VAC14-211ENST00000568886 A0A0A6YYK5 440 aaPredicted RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 GRXCR1A8MXD5 290 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 BHMG1C9JSJ3 638 aaPredicted RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 JAM2P57087 298 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 ALKBH5Q6P6C2 394 aaKnown RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 TADA2BQ86TJ2 420 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 C1orf127Q8N9H9 656 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 CXorf38Q8TB03 319 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 PBX4Q9BYU1 374 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 MTMR12Q9C0I1 747 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 INTUQ9ULD6 942 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
VAC14-211ENST00000568886 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 TRIM49P0CI25 452 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 TRIM49CP0CI26 452 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 RABGGTBP53611 331 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 PPP3CAQ08209 521 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 UPP1Q16831 310 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 KRT39Q6A163 491 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 SLFN11Q7Z7L1 901 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 LRRC52Q8N7C0 313 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 TPCN2Q8NHX9 752 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
VAC14-211ENST00000568886 HMGB1P1B2RPK0 211 aaPredicted RBP16.37■□□□□ 0.21
VAC14-211ENST00000568886 ANKRD65E5RJM6 399 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 PIRO00625 290 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 B4GALT3O60512 393 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 STAU1O95793 577 aaKnown RBP16.37■□□□□ 0.21
VAC14-211ENST00000568886 ALDH2P05091 517 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 GALTP07902 379 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 PPM1AP35813 382 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 PNPLA4P41247 253 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 BCAR1P56945 870 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 DCAF17Q5H9S7 520 aaPredicted RBP16.37■□□□□ 0.21
VAC14-211ENST00000568886 C9orf57Q5W0N0 161 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 DCLRE1AQ6PJP8 1040 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 LRIG3Q6UXM1 1119 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 COLGALT1Q8NBJ5 622 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 ATP6V1G3Q96LB4 118 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 ZNF558Q96NG5 402 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 COLEC11Q9BWP8 271 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 STK39Q9UEW8 545 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 YBX2Q9Y2T7 364 aaKnown RBP16.37■□□□□ 0.21
VAC14-211ENST00000568886 COQ4Q9Y3A0 265 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 FAM169AQ9Y6X4 670 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 LCHNA4D1U4 455 aa16.37■□□□□ 0.21
VAC14-211ENST00000568886 PGRMC1O00264 195 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms