RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 HEPHQ9BQS7 1158 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 MESP1Q9BRJ9 268 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 CTTNBP2NLQ9P2B4 639 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 MID2Q9UJV3 735 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 TBC1D30Q9Y2I9 924 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 GRXCR1A8MXD5 290 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 AHRRA9YTQ3 701 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 K7ESM1 405 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 RAB27BO00194 218 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 TOR1BO14657 336 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 AREL1O15033 823 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 ADAMTS3O15072 1205 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 DCLK1O15075 740 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 ATXN1LP0C7T5 689 aaKnown RBP5.63□□□□□ -1.51
LINC00560-201ENST00000564593 ACRV1P26436 265 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 EEF1GP26641 437 aaKnown RBP5.63□□□□□ -1.51
LINC00560-201ENST00000564593 SELENOPP49908 381 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 SATB1Q01826 763 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 GRM1Q13255 1194 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 SLC29A2Q14542 456 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 STARD3Q14849 445 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 ZRSR2Q15696 482 aaKnown RBP5.63□□□□□ -1.51
LINC00560-201ENST00000564593 PLA1AQ53H76 456 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 CATSPERGQ6ZRH7 1159 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 GAS2L3Q86XJ1 694 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 TMEM41AQ96HV5 264 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 SMOC2Q9H3U7 446 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 MAGED2Q9UNF1 606 aaPredicted RBP5.63□□□□□ -1.51
LINC00560-201ENST00000564593 SHOC2Q9UQ13 582 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 MAN2B2Q9Y2E5 1009 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 NEU2Q9Y3R4 380 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 FPGT-TNNI3KV9GXZ4 949 aa5.63□□□□□ -1.51
LINC00560-201ENST00000564593 A0A087WV62 115 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 LOC102723971A0A1B0GUV8 181 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 CLCA1A8K7I4 914 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 SUN1O94901 812 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 ELANEP08246 267 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 BTF3P20290 206 aaKnown RBP5.62□□□□□ -1.51
LINC00560-201ENST00000564593 IL1R2P27930 398 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 GCLCP48506 637 aaPredicted RBP5.62□□□□□ -1.51
LINC00560-201ENST00000564593 LILRA4P59901 499 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 MC2RQ01718 297 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 KRT17Q04695 432 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 PGBD2Q6P3X8 592 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 LRRC55Q6ZSA7 311 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 CLNKQ7Z7G1 428 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 TMEM132CQ8N3T6 1108 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 FANCBQ8NB91 859 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 CCDC150Q8NCX0 1101 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 TTLL2Q9BWV7 592 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 XPNPEP3Q9NQH7 507 aa5.62□□□□□ -1.51
LINC00560-201ENST00000564593 AURKAIP1Q9NWT8 199 aaPredicted RBP5.62□□□□□ -1.51
LINC00560-201ENST00000564593 RGS17Q9UGC6 210 aaPredicted RBP5.62□□□□□ -1.51
LINC00560-201ENST00000564593 E7ENX8 843 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 H7C4K7 107 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 PLA2G6O60733 806 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 FAM20BO75063 409 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 SOAT2O75908 522 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 INMTO95050 263 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 CFIP05156 583 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 MYL4P12829 197 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ITGALP20701 1170 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ACVR2AP27037 513 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 PXNP49023 591 aaPredicted RBP5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ANXA11P50995 505 aaKnown RBP5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ZNF134P52741 427 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 TAP2Q03519 686 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 TOB2Q14106 344 aaPredicted RBP5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ARHGEF7Q14155 803 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 INSCQ1MX18 579 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 MGAT5BQ3V5L5 792 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 SPDYE7PQ495Y7 208 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ZNF280BQ86YH2 543 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 VGLL2Q8N8G2 317 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 Q8NA96 180 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 SLC46A2Q9BY10 475 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 EIF2AQ9BY44 585 aaKnown RBP5.61□□□□□ -1.51
LINC00560-201ENST00000564593 MAGEB5Q9BZ81 275 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 ZNF768Q9H5H4 540 aaKnown RBP5.61□□□□□ -1.51
LINC00560-201ENST00000564593 KCNE5Q9UJ90 142 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
LINC00560-201ENST00000564593 PRAMEF33A0A0G2JMD5 474 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 RNASET2O00584 256 aaKnown RBP5.6□□□□□ -1.51
LINC00560-201ENST00000564593 MUSKO15146 869 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 PRAMEF10O60809 474 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 NBNO60934 754 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 NCR1O76036 304 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 A1BGP04217 495 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 CPT1AP50416 773 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 LOXL3P58215 753 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 CXADRP78310 365 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 FAM189BP81408 668 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 FPGSQ05932 587 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 DYRK1AQ13627 763 aa5.6□□□□□ -1.51
LINC00560-201ENST00000564593 ELF2Q15723 593 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms