RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SP9P0CG40 484 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 GARTP22102 1010 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 RPS9P46781 194 aaKnown RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 SERPINB4P48594 390 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 SEC13P55735 322 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 LSM11P83369 360 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 DUSP4Q13115 394 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 GRM2Q14416 872 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TEAD2Q15562 447 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 ARHGAP15Q53QZ3 475 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 CENPPQ6IPU0 288 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 VITQ6UXI7 678 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF852Q6ZMS4 543 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 CCDC65Q8IXS2 484 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 YAF2Q8IY57 180 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 EFCAB13Q8IY85 973 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 ADSSL1Q8N142 457 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 THEM5Q8N1Q8 247 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TTC9BQ8N6N2 239 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 OR10T2Q8NGX3 314 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 C1orf216Q8TAB5 229 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 SHKBP1Q8TBC3 707 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 SPPL2BQ8TCT7 592 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 KCNG4Q8TDN1 519 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 C2orf15Q8WU43 125 aaKnown RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 WNT2BQ93097 391 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 PSMG2Q969U7 264 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 CLIC6Q96NY7 704 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 SEPT5Q99719 369 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 FAM213AQ9BRX8 229 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 STRA6Q9BX79 667 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 BACH2Q9BYV9 841 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 PLA2G2FQ9BZM2 168 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 LRRC27Q9C0I9 530 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 DNAJC25Q9H1X3 360 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TNMDQ9H2S6 317 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 CRISPLD1Q9H336 500 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TMEM206Q9H813 350 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 HEBP1Q9NRV9 189 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 PANK4Q9NVE7 773 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 RBAKQ9NYW8 714 aaPredicted RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 TBC1D7Q9P0N9 293 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 FBXO4Q9UKT5 387 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 R4GN57 208 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 DENND4CQ5VZ89 1909 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 KPNA7A9QM74 516 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CYB561D2O14569 222 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF263O14978 683 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 EXTL3O43909 919 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 KINO60870 393 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 MOSPD3O75425 235 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TMEM191BP0C7N4 346 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 GLULP15104 373 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 GJA1P17302 382 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CDC25CP30307 473 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ADSSP30520 456 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 POLR2BP30876 1174 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 GDI1P31150 447 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TUFMP49411 452 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CASP5P51878 434 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CLDN10P78369 228 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TSPY1Q01534 308 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TAF12Q16514 161 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF528Q3MIS6 628 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 MGAT5BQ3V5L5 792 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 SLC39A12Q504Y0 691 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 C1orf228Q6PIY5 440 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CRELD2Q6UXH1 353 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 MFSD6LQ8IWD5 586 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 HSCBQ8IWL3 235 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 DCP1BQ8IZD4 617 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 LRRC52Q8N7C0 313 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 PDILTQ8N807 584 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ATAD1Q8NBU5 361 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 NOC3LQ8WTT2 800 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CACTINQ8WUQ7 758 aaKnown RBP8.68□□□□□ -1.02
TRAF3-205ENST00000558700 SAAL1Q96ER3 474 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 BORCS6Q96GS4 357 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 OCSTAMPQ9BR26 566 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ZCWPW1Q9H0M4 648 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 CUEDC2Q9H467 287 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 MAGEF1Q9HAY2 307 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ZMYM5Q9UJ78 669 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 ITGA11Q9UKX5 1188 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 PIAS3Q9Y6X2 628 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 GVINP1Q7Z2Y8 2422 aa8.68□□□□□ -1.02
TRAF3-205ENST00000558700 A0A087X0B3 334 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 HEPACAM2A8MVW5 462 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 NCANO14594 1321 aa8.67□□□□□ -1.02
TRAF3-205ENST00000558700 SPTLC2O15270 562 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms