RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MYBPHLA2RUH7 354 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 EXOC3O60645 756 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 ATP2C2O75185 946 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 TADA3O75528 432 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 VNN1O95497 513 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 STAU1O95793 577 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 HMGA1P17096 107 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 TNNI1P19237 187 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 WARSP23381 471 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 GABRR2P28476 465 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 VIPR2P41587 438 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 TUFMP49411 452 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 STARD6P59095 220 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 DLG4P78352 724 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 CYP4F8P98187 520 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 MYL7Q01449 175 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 GRM2Q14416 872 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 KCNB1Q14721 858 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 VITQ6UXI7 678 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 CLEC17AQ6ZS10 378 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 ITIH5Q86UX2 942 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 ZSCAN18Q8TBC5 510 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 MRPL45Q9BRJ2 306 aaKnown RBP11.07□□□□□ -0.64
SHMT2-224ENST00000556737 PI4K2AQ9BTU6 479 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 CRTAC1Q9NQ79 661 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 CACNA1HO95180 2353 aa11.07□□□□□ -0.64
SHMT2-224ENST00000556737 HELZP42694 1942 aaKnown RBP11.06□□□□□ -0.64
SHMT2-224ENST00000556737 ARNTLO00327 626 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 GLULP15104 373 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 LMO2P25791 158 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 PCSK1P29120 753 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 LHX1P48742 406 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 MYL6P60660 151 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 PSMC1P62191 440 aaKnown RBP11.06□□□□□ -0.64
SHMT2-224ENST00000556737 PNOCQ13519 176 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 VEPH1Q14D04 833 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-224ENST00000556737 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-224ENST00000556737 NFIL3Q16649 462 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 CFAP221Q4G0U5 840 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 SDHAF4Q5VUM1 108 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
SHMT2-224ENST00000556737 PJA1Q8NG27 643 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 DNASE1L2Q92874 299 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 MYLPFQ96A32 169 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 FOXQ1Q9C009 403 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 VRTNQ9H8Y1 702 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 ZFP14Q9HCL3 533 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 FAM86C1Q9NVL1 165 aa11.06□□□□□ -0.64
SHMT2-224ENST00000556737 ANAPC1Q9H1A4 1944 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 LRRN2O75325 713 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 TACC1O75410 805 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 AKAP3O75969 853 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 NOL4O94818 638 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 FGF19O95750 216 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 C4BPAP04003 597 aaKnown RBP11.05□□□□□ -0.64
SHMT2-224ENST00000556737 CYP2F1P24903 491 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 WEE1P30291 646 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 PFKPQ01813 784 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 PRKCQQ04759 706 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 DDR2Q16832 855 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 ZACNQ401N2 412 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 SLC44A4Q53GD3 710 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 SMYD4Q8IYR2 804 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-224ENST00000556737 DTWD2Q8NBA8 298 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 SPATA20Q8TB22 786 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 FAM200AQ8TCP9 573 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 DEPDC1BQ8WUY9 529 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 ELMO3Q96BJ8 720 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 FUBP3Q96I24 572 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-224ENST00000556737 LRRC3BQ96PB8 259 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 GPR88Q9GZN0 384 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 ATXN3LQ9H3M9 355 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 DPEP3Q9H4B8 488 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 SLITRK6Q9H5Y7 841 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 SMYD3Q9H7B4 428 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 CDH9Q9ULB4 789 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 MAPK8IP1Q9UQF2 711 aa11.05□□□□□ -0.64
SHMT2-224ENST00000556737 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 HEPACAM2A8MVW5 462 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 H0Y858 1186 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MAPK13O15264 365 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 KIF20AO95235 890 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 F11P03951 625 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms