RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CFAP221Q4G0U5 840 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 COBLL1Q53SF7 1204 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 ZNF658Q5TYW1 1059 aaPredicted RBP20.33■□□□□ 0.85
DDX54-208ENST00000551344 TDRD10Q5VZ19 366 aaKnown RBP20.33■□□□□ 0.85
DDX54-208ENST00000551344 ASTLQ6HA08 431 aaPredicted RBP20.33■□□□□ 0.85
DDX54-208ENST00000551344 TANGO2Q6ICL3 276 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 SMARCD2Q92925 531 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 SMARCE1Q969G3 411 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 ZSWIM3Q96MP5 696 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 LPIN3Q9BQK8 851 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 PI4K2AQ9BTU6 479 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 TRPV4Q9HBA0 871 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 PCDHA5Q9Y5H7 936 aa20.33■□□□□ 0.85
DDX54-208ENST00000551344 MYBPHLA2RUH7 354 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 NRG2O14511 850 aaPredicted RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 AKAP3O75969 853 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 NPR3P17342 541 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 PSMC2P35998 433 aaKnown RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 VAMP7P51809 220 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 VCPP55072 806 aaKnown RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 RPL10AP62906 217 aaKnown RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 DLG4P78352 724 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 PFKPQ01813 784 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 NCOA4Q13772 614 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 ZACNQ401N2 412 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 ZCWPW2Q504Y3 356 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 C4orf50Q6ZRC1 276 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 INTS8Q75QN2 995 aaKnown RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 GAREM2Q75VX8 874 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 SPATA2LQ8IUW3 424 aaPredicted RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 GIPC2Q8TF65 315 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 E2F7Q96AV8 911 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 SYT15Q9BQS2 421 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 SNX25Q9H3E2 840 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 ATXN3LQ9H3M9 355 aa20.32■□□□□ 0.84
DDX54-208ENST00000551344 ZNF334Q9HCZ1 680 aaPredicted RBP20.32■□□□□ 0.84
DDX54-208ENST00000551344 KRBA1A5PL33 1030 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 PDGFRBP09619 1106 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 FCARP24071 287 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 CYP2F1P24903 491 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 GABRR2P28476 465 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 CDC25CP30307 473 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 PRCPP42785 496 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 MCCD1P59942 119 aaPredicted RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 SGSM1Q2NKQ1 1148 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 IER5LQ5T953 404 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 SMYD4Q8IYR2 804 aaPredicted RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 FLCNQ8NFG4 579 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 OR6B3Q8NGW1 331 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 ZSCAN18Q8TBC5 510 aaPredicted RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 SHDQ96IW2 340 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 MRPL45Q9BRJ2 306 aaKnown RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 PLA2G2FQ9BZM2 168 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 SLITRK6Q9H5Y7 841 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 CHMP5Q9NZZ3 219 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
DDX54-208ENST00000551344 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 CA14Q9ULX7 337 aa20.31■□□□□ 0.84
DDX54-208ENST00000551344 HCRTO43612 131 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 KINO60870 393 aaKnown RBP20.3■□□□□ 0.84
DDX54-208ENST00000551344 ATP2C2O75185 946 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 VNN1O95497 513 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 CSH1P0DML2 217 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 CSH2P0DML3 217 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 KRT13P13646 458 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 MAGEA11P43364 429 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 ZNF699Q32M78 642 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 ARHGAP15Q53QZ3 475 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 ZNF667Q5HYK9 610 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 PHLDB3Q6NSJ2 640 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 FAM186BQ8IYM0 893 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 MYCBPAPQ8TBZ2 947 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 TAF4BQ92750 862 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 MKNK1Q9BUB5 465 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 CRTAC1Q9NQ79 661 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 ARHGEF3Q9NR81 526 aa20.3■□□□□ 0.84
DDX54-208ENST00000551344 CETN3O15182 167 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 P4HA1P13674 534 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
DDX54-208ENST00000551344 PSMC3P17980 439 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 AOC1P19801 751 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 WEE1P30291 646 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 DDR2Q16832 855 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 SLC44A4Q53GD3 710 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 C1orf220Q5T0J3 134 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 CWF19L1Q69YN2 538 aaKnown RBP20.29■□□□□ 0.84
DDX54-208ENST00000551344 VSTM1Q6UX27 236 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 TMEM105Q8N8V8 129 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 FAM122AQ96E09 287 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 CEP295NLQ96MC4 621 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 GCNAQ96QF7 691 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 TRMT61BQ9BVS5 477 aaKnown RBP20.29■□□□□ 0.84
DDX54-208ENST00000551344 TASP1Q9H6P5 420 aa20.29■□□□□ 0.84
DDX54-208ENST00000551344 MUC6Q6W4X9 2439 aa20.28■□□□□ 0.84
DDX54-208ENST00000551344 SOBPA7XYQ1 873 aa20.28■□□□□ 0.84
DDX54-208ENST00000551344 STK25O00506 426 aa20.28■□□□□ 0.84
DDX54-208ENST00000551344 GADD45BO75293 160 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms