RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TMEM189-UBE2V1I3L0A0 370 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 ATP1A1P05023 1023 aaKnown RBP32.26■■■□□ 2.76
CCM2-219ENST00000544363 CSF2RAP15509 400 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 RRM1P23921 792 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 TMEM199Q8N511 208 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 HASPINQ8TF76 798 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 SUSD3Q96L08 255 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 NUP85Q9BW27 656 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 MRPL9Q9BYD2 267 aaKnown RBP32.26■■■□□ 2.76
CCM2-219ENST00000544363 FAM49BQ9NUQ9 324 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 DNAJB4Q9UDY4 337 aa32.26■■■□□ 2.76
CCM2-219ENST00000544363 TIMM13Q9Y5L4 95 aaPredicted RBP32.26■■■□□ 2.76
CCM2-219ENST00000544363 ABHD14A-ACY1A0A1B0GW23 586 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 I3L4J1 428 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 CYP11A1P05108 521 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 ITGB1P05556 798 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 CALB1P05937 261 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 GPD2P43304 727 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 OR1G1P47890 313 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 GOLGA7BQ2TAP0 167 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 C2CD6Q53TS8 623 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 ERICH1Q86X53 443 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 NRDE2Q9H7Z3 1164 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 DDX43Q9NXZ2 648 aaKnown RBP32.26■■■□□ 2.75
CCM2-219ENST00000544363 CYTH4Q9UIA0 394 aa32.26■■■□□ 2.75
CCM2-219ENST00000544363 ARHGEF37A1IGU5 675 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 PAPD7Q5XG87 772 aaKnown RBP32.25■■■□□ 2.75
CCM2-219ENST00000544363 SLFN11Q7Z7L1 901 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 SYCE1Q8N0S2 351 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 B3GALNT2Q8NCR0 500 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 UBA3Q8TBC4 463 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 ZNF564Q8TBZ8 553 aaPredicted RBP32.25■■■□□ 2.75
CCM2-219ENST00000544363 LPIN3Q9BQK8 851 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 L2HGDHQ9H9P8 463 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 DSEQ9UL01 958 aa32.25■■■□□ 2.75
CCM2-219ENST00000544363 TBKBP1A7MCY6 615 aa32.24■■■□□ 2.75
CCM2-219ENST00000544363 F8W810 466 aa32.24■■■□□ 2.75
CCM2-219ENST00000544363 BUB1BO60566 1050 aaPredicted RBP32.23■■■□□ 2.75
CCM2-219ENST00000544363 PKDCCQ504Y2 493 aa32.23■■■□□ 2.75
CCM2-219ENST00000544363 METTL23Q86XA0 190 aa32.23■■■□□ 2.75
CCM2-219ENST00000544363 HESX1Q9UBX0 185 aa32.23■■■□□ 2.75
CCM2-219ENST00000544363 FTCDO95954 541 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PFKMP08237 780 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PTPN1P18031 435 aaKnown RBP32.22■■■□□ 2.75
CCM2-219ENST00000544363 ACAT1P24752 427 aaKnown RBP32.22■■■□□ 2.75
CCM2-219ENST00000544363 AMPD2Q01433 879 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PTPN20Q4JDL3 420 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PLEKHA7Q6IQ23 1121 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 DAAM2Q86T65 1068 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 UPP2O95045 317 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 CCDC130P13994 396 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PSMC1P62191 440 aaKnown RBP32.22■■■□□ 2.75
CCM2-219ENST00000544363 TUBB2AQ13885 445 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 MEI1Q5TIA1 1274 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PHLDB2Q86SQ0 1253 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 TTC30AQ86WT1 665 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 MSANTD4Q8NCY6 345 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 TUBB2BQ9BVA1 445 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PCDHB8Q9UN66 801 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 PRG3Q9Y2Y8 225 aaPredicted RBP32.22■■■□□ 2.75
CCM2-219ENST00000544363 LTBP2Q14767 1821 aa32.22■■■□□ 2.75
CCM2-219ENST00000544363 ATP2C2O75185 946 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 TYMPP19971 482 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 LLGL2Q6P1M3 1020 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 TLR10Q9BXR5 811 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 GOLPH3Q9H4A6 298 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 MRPL47Q9HD33 250 aaKnown RBP32.21■■■□□ 2.75
CCM2-219ENST00000544363 CDH9Q9ULB4 789 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 STRIP2Q9ULQ0 834 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 MRFAP1Q9Y605 127 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 SCINQ9Y6U3 715 aa32.21■■■□□ 2.75
CCM2-219ENST00000544363 FNDC1Q4ZHG4 1894 aaPredicted RBP32.2■■■□□ 2.75
CCM2-219ENST00000544363 RIOK3O14730 519 aaKnown RBP32.2■■■□□ 2.75
CCM2-219ENST00000544363 NRP1O14786 923 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 EFCAB14O75071 495 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 ALDH2P05091 517 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 SETSIPP0DME0 302 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 PCSK1P29120 753 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 PDCLQ13371 301 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 MAMLD1Q13495 774 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 KIAA0319Q5VV43 1072 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 LRRC43Q8N309 656 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 ANKRD52Q8NB46 1076 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 CPXM1Q96SM3 734 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 SYT15Q9BQS2 421 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 TMEM175Q9BSA9 504 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 ABCB6Q9NP58 842 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 PARVAQ9NVD7 372 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 SAR1BQ9Y6B6 198 aa32.2■■■□□ 2.75
CCM2-219ENST00000544363 TSC2P49815 1807 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 NCK2O43639 380 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 C11orf63Q6NUN7 778 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 SLC2A14Q8TDB8 520 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 TOP1MTQ969P6 601 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 C18orf8Q96DM3 657 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 HNRNPABQ99729 332 aaKnown RBP32.19■■■□□ 2.74
CCM2-219ENST00000544363 CDC23Q9UJX2 597 aa32.19■■■□□ 2.74
CCM2-219ENST00000544363 TRAPPC3O43617 180 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 TADA2AO75478 443 aa32.18■■■□□ 2.74
CCM2-219ENST00000544363 DGKIO75912 1065 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms